BLASTX nr result

ID: Cnidium21_contig00043265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043265
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    86   4e-15
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    79   4e-13
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    77   1e-12
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    76   3e-12
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]    75   6e-12

>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
 Frame = +1

Query: 202 ANPLFLHPSDGPHSIQVDKL---QGFHRLQSLVEINLGSKRKLGFVTGTVLKPTDDATQE 372
           A+P +LHPSD PH +    L   + + R   L   NL +K+KLGF+ GT+ KP+ D+   
Sbjct: 22  ASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFIDGTLTKPSSDSPDY 81

Query: 373 ELWETCNNMVIAWLTSNVSSTNQKSVMFMPTARLIWVNLELRFALTNGSR 522
             W   N+M++ WL +++    QKS+  +  AR++W +L  R+++ N SR
Sbjct: 82  PRWLQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNASR 131


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
 Frame = +1

Query: 196 DMANPLFLHPSDGPHSIQVDK-LQG--FHRLQSLVEINLGSKRKLGFVTGTVLKP--TDD 360
           D ANP FLH SD P  + + K L G  +      + I+L +K KLGF+ GT   P  TD 
Sbjct: 13  DAANPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTMPSATDK 72

Query: 361 ATQEELWETCNNMVIAWLTSNVSSTNQKSVMFMPTARLIWVNLELRFALTN 513
             +  LW+ CN+M+++W+ +++S     SV+F  TA+ +W +L  RF+ TN
Sbjct: 73  PDEHALWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTN 123


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
 Frame = +1

Query: 196 DMANPLFLHPSDGPHSIQVDK-LQG--FHRLQSLVEINLGSKRKLGFVTGTVLKP--TDD 360
           D ANP FLH SD P  + V K L G  +      + I+L +K KLGF+ GT   P  TD 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDK 72

Query: 361 ATQEELWETCNNMVIAWLTSNVSSTNQKSVMFMPTARLIWVNLELRFALTNGSR 522
             +   W+ CN+M+++W+ +++S     SV+F  TA+ +W +L  RF+ +N  R
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLXDRFSQSNAPR 126


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = +1

Query: 196 DMANPLFLHPSDGPHSIQVDK-LQG--FHRLQSLVEINLGSKRKLGFVTGTVLKP--TDD 360
           D ANP FLH SD P  + V K L G  +      + I+L +K KLGF+ GT   P  TD 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDK 72

Query: 361 ATQEELWETCNNMVIAWLTSNVSSTNQKSVMFMPTARLIWVNLELRFALTNGSR 522
             +   W+ CN+M+++W+ +++S     SV+F  TA+ +W +L   F+ +N  R
Sbjct: 73  PBEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDHFSQSNAPR 126


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = +1

Query: 196 DMANPLFLHPSDGPHSIQVDK-LQG--FHRLQSLVEINLGSKRKLGFVTGTVL--KPTDD 360
           D ANP FLH SD P  + V K L G  +      + I+L +K KLGF+ GT      TD 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMSSATDK 72

Query: 361 ATQEELWETCNNMVIAWLTSNVSSTNQKSVMFMPTARLIWVNLELRFALTNGSR 522
             +   W+ CN+M+++W+ +++S     SV+F  TA+ +W +L  RF+ +N  R
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPR 126


Top