BLASTX nr result

ID: Cnidium21_contig00043260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043260
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    75   7e-12
ref|XP_003619589.1| Defensin-like protein [Medicago truncatula] ...    71   8e-11
ref|XP_003604594.1| Helicase-like protein [Medicago truncatula] ...    70   2e-10
ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    70   2e-10
ref|XP_003600221.1| Helicase-like protein [Medicago truncatula] ...    70   2e-10

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281  DVEITESLSAMLNRENALVDIYRDVRDRFKDLDIVPAQLRLIANRETDGRESNIPTNAYE 102
            D  + E L  ML+  N L   +R  RDR    D    +L+LI +R+ DGR  N+PT A E
Sbjct: 885  DTGVVEELKKMLDEYNPLAKAFRIARDRLCSDDCSNIRLKLIGSRDKDGRRYNLPT-ASE 943

Query: 101  FAALVAN--DNLTDSRDILVQTRGGNLHRISVLHP 3
             AAL+    DN  ++RDI+ +TRGG L RIS LHP
Sbjct: 944  VAALIIGDIDNFANNRDIVAETRGGALQRISELHP 978


>ref|XP_003619589.1| Defensin-like protein [Medicago truncatula]
           gi|355494604|gb|AES75807.1| Defensin-like protein
           [Medicago truncatula]
          Length = 1645

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 QQQLEERLNFPNGDNRLDVEITESLSAMLNRENALVDIYRDVRDRFKDLDIVPAQLRLIA 153
           + +L+ RL   +  N+LD+++  +L  ML+  N     +R  RDR  + D+   +L+LI+
Sbjct: 393 ENELQHRLQGLSNANQLDIQMIAALQKMLDENNVHAKSFRMARDRLSEGDVQNLKLKLIS 452

Query: 152 NRETDGRESNIPTNAYEFAALVAND-NLTDSRDILVQTRGGNLHRISVLHP 3
            R TDGR  N PT   E AAL+  D +    RDI+++T+ G L RI   HP
Sbjct: 453 ERTTDGRIYNQPT-VSEVAALILGDVDYAPRRDIIMETQCGELQRIDEFHP 502


>ref|XP_003604594.1| Helicase-like protein [Medicago truncatula]
           gi|355505649|gb|AES86791.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1689

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 QQQLEERLNFPNGDNRLDVEITESLSAMLNRENALVDIYRDVRDRFKDLDIVPAQLRLIA 153
           + +L+ RL   +  N+LD+++  +L  ML+  N     +R  RDR  + D+   +L+LI+
Sbjct: 418 ENELQHRLQGLSNANQLDIQMIAALQKMLDENNVHAKSFRMARDRLCEGDVQNLKLKLIS 477

Query: 152 NRETDGRESNIPTNAYEFAALVAND-NLTDSRDILVQTRGGNLHRISVLHP 3
            R TDGR  N PT   E AAL+  D +    RDI+++T+ G L RI   HP
Sbjct: 478 ERTTDGRIYNQPT-VSEVAALILGDVDYAPRRDIIMETQCGELQRIDEFHP 527


>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
           gi|355501940|gb|AES83143.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1844

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = -2

Query: 326 QLEERLNFPNGDNRLDVEITESLSAMLNRENALVDIYRDVRDRFKDLDIVPAQLRLIANR 147
           ++  R+N    +  +D EI + L  ML++ N    ++R  RD   D++    +L+LIA+R
Sbjct: 575 EISNRMNSFRTNKDIDEEIVKKLKLMLDQNNVHAKVFRMARDMLNDVNFQDVKLKLIADR 634

Query: 146 ETDGRESNIPTNAYEFAALVAND-NLTDSRDILVQTRGGNLHRISVLH 6
           +TDGR  N PT   E AALV  D +    RDI++Q + GNL RI   H
Sbjct: 635 KTDGRIYNKPT-VSEVAALVLGDIDSASYRDIIMQGQSGNLQRIDEFH 681


>ref|XP_003600221.1| Helicase-like protein [Medicago truncatula]
           gi|355489269|gb|AES70472.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1694

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 QQQLEERLNFPNGDNRLDVEITESLSAMLNRENALVDIYRDVRDRFKDLDIVPAQLRLIA 153
           + +L+ RL   +  N LD+++  +L  ML+  N     +R  RDR  + D+   +L+LI+
Sbjct: 382 ENELQHRLQGLSNANLLDIQMIAALQKMLDENNVHAKSFRMARDRLSEGDVQNLKLKLIS 441

Query: 152 NRETDGRESNIPTNAYEFAALVAND-NLTDSRDILVQTRGGNLHRISVLHP 3
            R TDGR  N PT   E AAL+  D +    RDI+++T+ G L RI   HP
Sbjct: 442 ERTTDGRIYNQPT-VSEVAALILGDVDYAPRRDIIMETQCGELQRIDEFHP 491


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