BLASTX nr result

ID: Cnidium21_contig00043256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043256
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588932.1| hypothetical protein MTR_1g015430 [Medicago ...    94   1e-17
ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomen...    82   6e-14
ref|XP_002338214.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus tr...    80   2e-13
ref|XP_002319333.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_003588932.1| hypothetical protein MTR_1g015430 [Medicago truncatula]
           gi|355477980|gb|AES59183.1| hypothetical protein
           MTR_1g015430 [Medicago truncatula]
          Length = 219

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/48 (83%), Positives = 45/48 (93%)
 Frame = +2

Query: 104 LAREVNHRTYGPTNWERINRFLFGSDSSFPNAAYNSPLYCAPQVCLFP 247
           LAR+VNHRTYGP+NW+RIN+FLFGSDSSFPNA YN PLYC+ QVCLFP
Sbjct: 126 LARKVNHRTYGPSNWKRINKFLFGSDSSFPNATYNYPLYCSLQVCLFP 173


>ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomentosiformis]
           gi|81301638|ref|YP_398933.1| hypothetical protein
           NitoCp122 [Nicotiana tomentosiformis]
           gi|351653934|ref|YP_004891660.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|351653949|ref|YP_004891676.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|76559646|emb|CAJ32484.1| hypothetical protein
           [Nicotiana tabacum] gi|76559648|emb|CAJ32486.1|
           hypothetical protein [Nicotiana tabacum]
           gi|77799619|dbj|BAE46708.1| hypothetical protein
           [Nicotiana sylvestris] gi|77799635|dbj|BAE46724.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|80750981|dbj|BAE48057.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|80750997|dbj|BAE48073.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|347453960|gb|AEO95618.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453975|gb|AEO95633.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454070|gb|AEO95727.1| hypothetical protein
           [synthetic construct] gi|347454085|gb|AEO95742.1|
           hypothetical protein [synthetic construct]
          Length = 71

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 284 VLSQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 159
           V+SQRLA VRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY
Sbjct: 30  VISQRLARVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 71


>ref|XP_002338214.1| predicted protein [Populus trichocarpa] gi|222871287|gb|EEF08418.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -3

Query: 284 VLSQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 159
           V+S+RLAMVRKKGGTSTLGERST ESCMLRSGRMNRSRKGIY
Sbjct: 40  VISKRLAMVRKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY 81


>ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus trichocarpa]
           gi|134093266|ref|YP_001109567.1| hypothetical protein
           Poptr_cp089 [Populus trichocarpa]
           gi|133712113|gb|ABO36756.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712128|gb|ABO36771.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 71

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = -3

Query: 284 VLSQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 159
           V+S+RLAMVRKKGGTSTLGERST ESCMLRSGRMNRSRKGIY
Sbjct: 30  VISKRLAMVRKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY 71


>ref|XP_002319333.1| predicted protein [Populus trichocarpa] gi|222857709|gb|EEE95256.1|
           predicted protein [Populus trichocarpa]
          Length = 71

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -3

Query: 284 VLSQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 159
           V+S+RL MVRKKGGTSTLGERST ESCMLRSGRMNRSRKGIY
Sbjct: 30  VISKRLVMVRKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY 71


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