BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043249
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            145   4e-33
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            143   2e-32
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   142   3e-32
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   137   1e-30
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   137   1e-30

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  145 bits (367), Expect = 4e-33
 Identities = 75/205 (36%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
 Frame = -3

Query: 602 TREVKATGVVKNCLYYLQEFSPEAITCNLSESTSFT------VWHHRLGHAPLEKLNHIP 441
           T +VK TG ++N LYY        +  ++S S + +      +WH RLGH P + L  + 
Sbjct: 224 TVKVKGTGSMENGLYYWSHIVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIPHKVLQQMQ 283

Query: 440 LLKGRLRDIRQVCITGPMYKFVKLPFDLSKSHVAYNFELLHIDAWGPYKIPTREKYKYF* 261
           +           C   P+ K  +LPF  S +     F+L+H D WGPYK PT +  +YF 
Sbjct: 284 IPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDGNRYFL 343

Query: 260 TIVNDHSRFTWLYLKHLKSDYLSIMHSFATYVKNYFSANIKHIRTDNALEFSTKACKEFY 81
           T+V+D SR  W++L   KSD   ++  F   ++  F   IK  R+DN  EF    C E +
Sbjct: 344 TLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNSHCSELF 403

Query: 80  TKLGILHQASCPYRPQQNSRVERKH 6
              GI+HQ+SC Y PQQN  VER+H
Sbjct: 404 RTAGIVHQSSCVYTPQQNGVVERRH 428


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  143 bits (361), Expect = 2e-32
 Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = -3

Query: 494 VWHHRLGHAPLEKLNHIPLLKGRLRD-IRQVCITGPMYKFVKLPFDLSKSHVAYNFELLH 318
           +WH RLGH   + L  + +      D I   C   P+ K  +L F +S +  +  F+++H
Sbjct: 503 IWHRRLGHPSQQILKLLKIDSSSKGDGIPAHCPVCPLAKQTRLTFPVSTTRTSMMFDVVH 562

Query: 317 IDAWGPYKIPTREKYKYF*TIVNDHSRFTWLYLKHLKSDYLSIMHSFATYVKNYFSANIK 138
           +D WGPYK PT  +  YF TIV+D+SRF W++L  LKS+ +  + +F + +   F++++K
Sbjct: 563 MDLWGPYKTPTLNRKHYFLTIVDDYSRFVWVHLLQLKSETIVAIKNFFSMINTQFNSHVK 622

Query: 137 HIRTDNALEFSTKACKEFYTKLGILHQASCPYRPQQNSRVERKH 6
            +R+DN  EF    CK+ +  LGILHQ+SCP+ PQQN  VERKH
Sbjct: 623 VVRSDNGTEFLNSQCKDLFNHLGILHQSSCPHTPQQNGVVERKH 666


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  142 bits (359), Expect = 3e-32
 Identities = 74/178 (41%), Positives = 101/178 (56%)
 Frame = -3

Query: 539  PEAITCNLSESTSFTVWHHRLGHAPLEKLNHIPLLKGRLRDIRQVCITGPMYKFVKLPFD 360
            P   TCN+  + +  +WH RLGH   +     P L+ +  D+   C   P+ K  + PF 
Sbjct: 517  PRKGTCNVVNTKTQDLWHQRLGHPSSKVSVLFPFLQNKTLDV-STCSICPLAKHTRTPFP 575

Query: 359  LSKSHVAYNFELLHIDAWGPYKIPTREKYKYF*TIVNDHSRFTWLYLKHLKSDYLSIMHS 180
            LS S     F+L+H+D WG Y +P+    +YF TIV+DHSR TW+YL H KS+  S++  
Sbjct: 576  LSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVH 635

Query: 179  FATYVKNYFSANIKHIRTDNALEFSTKACKEFYTKLGILHQASCPYRPQQNSRVERKH 6
            F   V N F + +K +R+DN  EF      +FY+  GILHQ SC   PQQN  VERKH
Sbjct: 636  FVNLVANQFGSQVKIVRSDNGPEFKH---TQFYSSRGILHQTSCINTPQQNGVVERKH 690


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  137 bits (346), Expect = 1e-30
 Identities = 82/189 (43%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
 Frame = -3

Query: 563  LYYLQEFSPEAITCNLSESTSFTVWHHRLGHAPLEKLNHIPLLKGRLRDIRQ---VCITG 393
            LY L   SP AI+ N     S  VWH RLGH    +L+ +  + G  R   +    C   
Sbjct: 548  LYVLDTQSP-AISVNAVVDVS--VWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVC 604

Query: 392  PMYKFVKLPFDLSKSHVAYNFELLHIDAWGPYKIPTREKYKYF*TIVNDHSRFTWLYLKH 213
             + K  KL F  + +     FELLHID WGP+ + T E YKYF TIV+DHSR TW+YL  
Sbjct: 605  HLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLK 664

Query: 212  LKSDYLSIMHSFATYVKNYFSANIKHIRTDNALEFSTKACKEFYTKLGILHQASCPYRPQ 33
             KSD L++  +F   V+N +   +K +R+DNA E    A  EFY   GI+   SCP  P+
Sbjct: 665  SKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKEL---AFTEFYKAKGIVSFHSCPETPE 721

Query: 32   QNSRVERKH 6
            QNS VERKH
Sbjct: 722  QNSVVERKH 730


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  137 bits (345), Expect = 1e-30
 Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 6/205 (2%)
 Frame = -3

Query: 602  TREVKATGVVKNCLYYLQEFSPEAITCNLSESTSFTVWHHRLGHAPLEKLNH------IP 441
            T++V  TG  +N LY L+     A+  N   + +  VWHHRLGHA  + L H      I 
Sbjct: 419  TQKVVTTGPRRNGLYVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQ 478

Query: 440  LLKGRLRDIRQVCITGPMYKFVKLPFDLSKSHVAYNFELLHIDAWGPYKIPTREKYKYF* 261
            + K R   + + C  G   K  +LPF +S S V +  + +H D WGP  + + +  KY+ 
Sbjct: 479  INKSRTSPVCEPCQMG---KSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYA 535

Query: 260  TIVNDHSRFTWLYLKHLKSDYLSIMHSFATYVKNYFSANIKHIRTDNALEFSTKACKEFY 81
              V+D+SR++W Y  H KS++LS+  SF   V+N  +  IK  ++D   EF +   K   
Sbjct: 536  IFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHL 595

Query: 80   TKLGILHQASCPYRPQQNSRVERKH 6
            ++ GI H+ SCPY PQQN   ERKH
Sbjct: 596  SEHGIHHRISCPYTPQQNGLAERKH 620