BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043238
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]   202   2e-50
ref|XP_002882733.1| pentatricopeptide repeat-containing protein ...   173   1e-41
ref|NP_187753.1| pentatricopeptide repeat-containing protein [Ar...   172   3e-41
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...   170   1e-40

>ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|222846511|gb|EEE84058.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  226 bits (576), Expect = 1e-57
 Identities = 105/170 (61%), Positives = 137/170 (80%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           N F+ASALIDMYS+CG+  +AR  F+ I  KNVASWNAMIGCYGKHGMV+++IQLFERM 
Sbjct: 332 NAFIASALIDMYSECGSFKEARTVFEKIHNKNVASWNAMIGCYGKHGMVNTSIQLFERMH 391

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
            EG+Q N VTL CVLSACSH G+V+KGLEIF SM++ Y ++  +EHY+CVVD+L R GR+
Sbjct: 392 GEGIQANDVTLLCVLSACSHSGYVEKGLEIFWSMKERYMVDRKKEHYACVVDMLSRSGRL 451

Query: 362 DEAYDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAKRIAEVFSEMETRRP 511
            +AY+ VKEMP+ VT+SI GAFFNGC +H RRDLA+++ +  +  + ++P
Sbjct: 452 VDAYELVKEMPIEVTKSIAGAFFNGCMIHGRRDLAEKMIDDVTRGDLKKP 501



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/96 (38%), Positives = 56/96 (58%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           +V VA+AL+DMYSKCG +  AR  FD +  +++ SW +MI  Y   G ++ A+ LFERM 
Sbjct: 160 DVCVANALVDMYSKCGCIGYARTVFDRMAKRDIVSWTSMISGYCNVGKIEEALVLFERMK 219

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRK 289
            EG++PN  T   ++S  +  G  D    +   M +
Sbjct: 220 LEGLEPNDFTWNALISGYARRGDSDGAFSLLSKMTR 255


>emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
          Length = 566

 Score =  202 bits (514), Expect = 2e-50
 Identities = 105/170 (61%), Positives = 118/170 (69%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           NVFVA+ALID YSKCGTV DA + FD IPIKNVASWNAMIGCYGKHG+VDS+IQLFERM 
Sbjct: 331 NVFVATALIDXYSKCGTVKDAWDVFDRIPIKNVASWNAMIGCYGKHGLVDSSIQLFERMQ 390

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
            EGMQ N +TL  VLSACSH G V+KGL IF                           RM
Sbjct: 391 AEGMQANHITLISVLSACSHGGLVEKGLTIF---------------------------RM 423

Query: 362 DEAYDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAKRIAEVFSEMETRRP 511
            EAY+  KEMP+ VT+SI+GAFFNGCK+H RRDLAK +AE    ME +RP
Sbjct: 424 VEAYELFKEMPIEVTDSIVGAFFNGCKIHGRRDLAKXMAEDILRMELKRP 473



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/93 (37%), Positives = 52/93 (55%)
 Frame = +2

Query: 5   VFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMGT 184
           V VA++ IDMY KCG V   R  FD +  ++V SW +MI  Y   G ++ A+ LFERM  
Sbjct: 161 VSVANSXIDMYCKCGHVGYGRKVFDGMIERDVVSWTSMICGYCNIGTLEEALVLFERMKV 220

Query: 185 EGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSM 283
           EG++PN  T   +++  +  G  +    +F  M
Sbjct: 221 EGLEPNDFTWNXMIAGYARDGDCNGAFVLFSRM 253


>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328573|gb|EFH58992.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 620

 Score =  173 bits (438), Expect = 1e-41
 Identities = 77/156 (49%), Positives = 108/156 (69%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           NVF+++ALI MY++CG +  AR  FD +P+K++ SW AMIGCYG HGM ++ + LF+ M 
Sbjct: 288 NVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMI 347

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
             G++P+      VLSACSH G  DKGLE+FR+M++ Y LE   EHYSC+VDLL R GR+
Sbjct: 348 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 407

Query: 362 DEAYDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAK 469
           DEA +F+  MP+    ++ GA    CK+H   D+A+
Sbjct: 408 DEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAE 443



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/89 (40%), Positives = 56/89 (62%)
 Frame = +2

Query: 5   VFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMGT 184
           V V ++ I MY KCG+V   R  FD +P+K + +WNA+I  Y ++G+    ++LFE+M +
Sbjct: 188 VAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKS 247

Query: 185 EGMQPNSVTLTCVLSACSHCGFVDKGLEI 271
            G+ P+  TL  VLS+C+H G    G E+
Sbjct: 248 SGVCPDPFTLVSVLSSCAHLGAKKIGQEV 276


>ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g11460 gi|12322902|gb|AAG51440.1|AC008153_13
           hypothetical protein; 50785-52656 [Arabidopsis thaliana]
           gi|332641528|gb|AEE75049.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  172 bits (435), Expect = 3e-41
 Identities = 77/156 (49%), Positives = 107/156 (68%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           NVFV++A I MY++CG +  AR  FD +P+K++ SW AMIGCYG HGM +  + LF+ M 
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
             G++P+      VLSACSH G  DKGLE+FR+M++ Y LE   EHYSC+VDLL R GR+
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410

Query: 362 DEAYDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAK 469
           DEA +F++ MP+    ++ GA    CK+H   D+A+
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/89 (39%), Positives = 56/89 (62%)
 Frame = +2

Query: 5   VFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMGT 184
           V V ++ I MY KCG+V   R  FD +P+K + +WNA+I  Y ++G+    ++L+E+M +
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250

Query: 185 EGMQPNSVTLTCVLSACSHCGFVDKGLEI 271
            G+ P+  TL  VLS+C+H G    G E+
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
 Frame = +2

Query: 8   FVASALIDMYSKCGTVTDARNAFDTIPIKNVAS--WNAMIGCYGKHGMVDSAIQLFERMG 181
           FV +ALI MY KCG V DAR  F+  P  +  S  +NA+I  Y  +  V  A  +F RM 
Sbjct: 89  FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMR-KCY--DLEASQEHYSCVVDLLCRF 352
             G+  +SVT+  ++  C+    V + L + RS+  +C    L++     +  + +  + 
Sbjct: 149 ETGVSVDSVTMLGLVPLCT----VPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204

Query: 353 GRMDEAYDFVKEMP---LAVTESIIGAFFNGCKLHNRRDLAKRIAEVFSEMET 502
           G ++       EMP   L    ++I  +       ++  LA  + E++ +M++
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGY-------SQNGLAYDVLELYEQMKS 250


>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/170 (46%), Positives = 113/170 (66%)
 Frame = +2

Query: 2    NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
            +V + +AL+DMYSKCG +T AR  FD +  KN+ SWNAMI  Y KHG    A+ L+E M 
Sbjct: 747  SVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 806

Query: 182  TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
             +GM PN VT   +LSACSH G V++GL IF SM++ Y++EA  EHY+C+VDLL R GR+
Sbjct: 807  KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRL 866

Query: 362  DEAYDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAKRIAEVFSEMETRRP 511
            ++A +FV++MP+    S  GA    C++H   D+ +  A+   E++ + P
Sbjct: 867  EDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNP 916



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
 Frame = +2

Query: 2    NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
            N+ V + L+ MYS+CG +  A+  F+ +  +N  SWN+MI  Y ++G    A++LF++M 
Sbjct: 513  NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572

Query: 182  TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
              G++P+  +L+ +LS+C       KG E+   + +   +E        +VD+  + G M
Sbjct: 573  LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR-NTMEEEGILQVVLVDMYAKCGSM 631

Query: 362  DEA---YDFVKEMPLAVTESIIGAFFNGCKLHNRRDLAKRIAEVFSEMETR 505
            D A   YD   +  + +   ++ AF N  + ++ ++L       F +ME R
Sbjct: 632  DYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNL-------FDQMEQR 675



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/91 (35%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           ++ + SAL+DMYSKCG V +A   F ++  +N  S+NA++  Y + G  + A++L+  M 
Sbjct: 411 DIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQ 470

Query: 182 TE-GMQPNSVTLTCVLSACSHCGFVDKGLEI 271
           +E G+QP+  T T +L+ C++    ++G +I
Sbjct: 471 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 501



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/130 (28%), Positives = 64/130 (49%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           + FV +ALIDMY+KC         FD +  +N  +WN++I    + G  + A+ LF RM 
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKCYDLEASQEHYSCVVDLLCRFGRM 361
             G + N   L  +L A +    + KG E+   + +   L +     S +VD+  + G +
Sbjct: 370 ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMV 428

Query: 362 DEAYDFVKEM 391
           +EA+   + +
Sbjct: 429 EEAHQVFRSL 438



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/97 (31%), Positives = 49/97 (50%)
 Frame = +2

Query: 2   NVFVASALIDMYSKCGTVTDARNAFDTIPIKNVASWNAMIGCYGKHGMVDSAIQLFERMG 181
           N+FV  AL+D Y++ G + DA  + D I   +V +WNA+I  Y K    + A  +F+RM 
Sbjct: 209 NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRML 268

Query: 182 TEGMQPNSVTLTCVLSACSHCGFVDKGLEIFRSMRKC 292
             G+ P++ T    L  C      D G ++   +  C
Sbjct: 269 KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC 305