BLASTX nr result

ID: Cnidium21_contig00043202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043202
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540777.1| PREDICTED: vacuolar protein sorting-associat...   198   4e-49
ref|XP_003538149.1| PREDICTED: vacuolar protein sorting-associat...   198   4e-49
ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associat...   196   2e-48
emb|CBI17115.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ri...   193   1e-47

>ref|XP_003540777.1| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Glycine max]
          Length = 957

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 348  HAGRDFHDMQVELYADHDPKVLLRFLRNCQHYKLMKAYEICVSRGLLREQVYILRRMGNS 169
            HAG+DFHDMQVELYAD+DPK+LL FLR+ QHY L KAYEIC+ R LLREQV+IL RMGNS
Sbjct: 655  HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNS 714

Query: 168  KQALVVIINELGDVRQAIEFVSMQRDDELWEELITQCIHKPEMVGVLLEHTVGNLD 1
            KQAL VIIN+LGD+ +A+EFV+MQ DDELWEELI QC+HKPEMVG+LLEHTVGNLD
Sbjct: 715  KQALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLD 770


>ref|XP_003538149.1| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Glycine max]
          Length = 957

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 348  HAGRDFHDMQVELYADHDPKVLLRFLRNCQHYKLMKAYEICVSRGLLREQVYILRRMGNS 169
            HAG+DFHDMQVELYAD+DPK+LL FLR+ QHY L KAYEIC+ R LLREQV+IL RMGNS
Sbjct: 653  HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNS 712

Query: 168  KQALVVIINELGDVRQAIEFVSMQRDDELWEELITQCIHKPEMVGVLLEHTVGNLD 1
            KQAL VIIN+LGD+ +A+EFV+MQ DDELWEELI QC+HKPEMVG+LLEHTVGNLD
Sbjct: 713  KQALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLD 768


>ref|XP_002273250.2| PREDICTED: vacuolar protein sorting-associated protein 41 homolog
            [Vitis vinifera]
          Length = 960

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 348  HAGRDFHDMQVELYADHDPKVLLRFLRNCQHYKLMKAYEICVSRGLLREQVYILRRMGNS 169
            HAG+DFHDMQVELYAD+DPK+LL FLR+ QHY L KAYEIC+ R LLREQV+IL RMGNS
Sbjct: 659  HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNS 718

Query: 168  KQALVVIINELGDVRQAIEFVSMQRDDELWEELITQCIHKPEMVGVLLEHTVGNLD 1
            KQAL VIIN+LGD+ +A+EFV+MQ DDELWEELI QC++KPEMVGVLLEHTVGNLD
Sbjct: 719  KQALAVIINQLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLD 774


>emb|CBI17115.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 348 HAGRDFHDMQVELYADHDPKVLLRFLRNCQHYKLMKAYEICVSRGLLREQVYILRRMGNS 169
           HAG+DFHDMQVELYAD+DPK+LL FLR+ QHY L KAYEIC+ R LLREQV+IL RMGNS
Sbjct: 607 HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNS 666

Query: 168 KQALVVIINELGDVRQAIEFVSMQRDDELWEELITQCIHKPEMVGVLLEHTVGNLD 1
           KQAL VIIN+LGD+ +A+EFV+MQ DDELWEELI QC++KPEMVGVLLEHTVGNLD
Sbjct: 667 KQALAVIINQLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLD 722


>ref|XP_002523748.1| vacuolar protein sorting vps41, putative [Ricinus communis]
            gi|223537052|gb|EEF38688.1| vacuolar protein sorting
            vps41, putative [Ricinus communis]
          Length = 955

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/116 (77%), Positives = 105/116 (90%)
 Frame = -3

Query: 348  HAGRDFHDMQVELYADHDPKVLLRFLRNCQHYKLMKAYEICVSRGLLREQVYILRRMGNS 169
            HAG+DFHDMQVELYAD+DPK+LL FLR+ QHY L KAY+IC+ R LLREQV+IL RMGNS
Sbjct: 656  HAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYDICIKRDLLREQVFILGRMGNS 715

Query: 168  KQALVVIINELGDVRQAIEFVSMQRDDELWEELITQCIHKPEMVGVLLEHTVGNLD 1
            K+AL VIIN+LGD+ +A+EFV+MQ DDELWEELI QC++KPEMVGVLLEHTVGNLD
Sbjct: 716  KKALAVIINKLGDIEEAVEFVTMQHDDELWEELIRQCLNKPEMVGVLLEHTVGNLD 771


Top