BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043199
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   122   2e-26
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]   122   2e-26
ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selag...    88   8e-16

>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/115 (53%), Positives = 83/115 (72%)
 Frame = +3

Query: 12  FLSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQR 191
           F SAL++MYC+ GE +  A+L FE S+ +DVVLWSSII G           ++ FN M+ 
Sbjct: 291 FSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSII-GSFSRRGDSFKALKLFNKMRT 349

Query: 192 EEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           EEI PNYVT+L +ISACTNLSS+ HG  +HGY+ K+G  F +S+GN+L+NMY+KC
Sbjct: 350 EEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKC 404



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +3

Query: 12  FLS-ALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQ 188
           FLS AL+  Y + G+SL  A   F+    K+VV W+++I+GC             F  MQ
Sbjct: 189 FLSTALVDFYFRCGDSL-MALRVFDGMEVKNVVSWTTMISGCIAHQDYDEA-FACFRAMQ 246

Query: 189 REEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
            E + PN VT + L+SAC     + HG+ +HGY  ++G     S  ++LVNMY +C
Sbjct: 247 AEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQC 302


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = +3

Query: 3   DNHFLSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNL 182
           D+HFLS+LIH+YC+S E L  AKLTFE SN KDVV+WSSII G           ++ F  
Sbjct: 263 DHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSII-GSYCRSADSIEALKLFRW 321

Query: 183 MQREEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           M+ +   PN VT+L +I+ACT L+S+ +G   HGY++K GL F+  IGN+L+NMYSKC
Sbjct: 322 MRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKC 379



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/113 (29%), Positives = 60/113 (53%)
 Frame = +3

Query: 15  LSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQRE 194
           L++L+  Y KSG+SL  A   F+    K+VV W+++++GC          +  F  MQ  
Sbjct: 166 LTSLVDWYFKSGDSL-MALRVFDQIEVKNVVSWTALVSGCSANLDYNMA-LDCFRAMQIN 223

Query: 195 EIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSK 353
            + PN VT++ ++ A   L     G+ +HGY  ++G   +    +SL+++Y +
Sbjct: 224 GVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCR 276


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/115 (52%), Positives = 81/115 (70%)
 Frame = +3

Query: 12  FLSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQR 191
           F  ALI++YC+ G+SL  A+  FE S+ +DVVLWSSII G           ++ FN M+ 
Sbjct: 310 FSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSII-GSYARRGESDKALKLFNKMRT 368

Query: 192 EEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           EE  PNYVT+L +ISACTNLSS  HG V+HGY+LK+G+ F + + N+L+NMY+KC
Sbjct: 369 EETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC 423



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +3

Query: 12  FLS-ALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQ 188
           FLS A +  Y + G+SL  A+  F+    K+ V W+++I+GC          +  +  MQ
Sbjct: 208 FLSTAFVDFYFRCGDSL-MARSVFDEMEVKNEVSWTAVISGCANNQDYDVA-LACYREMQ 265

Query: 189 REEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
            E ++PN VT++ L++AC     + +G+ +HGY  + G     S   +L+ +Y +C
Sbjct: 266 VEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCEC 321


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/115 (52%), Positives = 81/115 (70%)
 Frame = +3

Query: 12  FLSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQR 191
           F  ALI++YC+ G+SL  A+  FE S+ +DVVLWSSII G           ++ FN M+ 
Sbjct: 310 FSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSII-GSYARRGESDKALKLFNKMRT 368

Query: 192 EEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           EE  PNYVT+L +ISACTNLSS  HG V+HGY+LK+G+ F + + N+L+NMY+KC
Sbjct: 369 EETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC 423



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +3

Query: 12  FLS-ALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQ 188
           FLS A +  Y + G+SL  A+  F+    K+ V W+++I+GC          +  +  MQ
Sbjct: 208 FLSTAFVDFYFRCGDSL-MARSVFDEMEVKNEVSWTAVISGCANNQDYDVA-LACYREMQ 265

Query: 189 REEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
            E ++PN VT++ L++AC     + +G+ +HGY  + G     S   +L+ +Y +C
Sbjct: 266 VEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCEC 321


>ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
           gi|300167956|gb|EFJ34560.1| hypothetical protein
           SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/118 (38%), Positives = 71/118 (60%)
 Frame = +3

Query: 3   DNHFLSALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNL 182
           D+   +ALI+MY K G SL++A+  F+   N+DV+ W+++I+G           +  F  
Sbjct: 197 DSIVQNALINMYSKCG-SLESARKVFDRLKNRDVIAWNTMISG-YAKQGAATQALELFQR 254

Query: 183 MQREEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           M   +  PN VT +GL++ACTNL  +  GR +H  V ++G   +L IGN L+NMY+KC
Sbjct: 255 MGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC 312



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/113 (30%), Positives = 59/113 (52%)
 Frame = +3

Query: 18  SALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQREE 197
           + L++MY K   SL+ A+  FE    +DV+ W+ +I             +  F  MQ E 
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVA-YVQYGQAKDALDIFKQMQLEN 361

Query: 198 IAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           +APN +T+  ++SAC  L +   G+ VH  +       ++ + NSL+NMY++C
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = +3

Query: 18  SALIHMYCKSGESLDNAKLTFELSNNKDVVLWSSIIAGCXXXXXXXXXXIRFFNLMQR-- 191
           +ALI MY +  + L+ A+ TF+    K +V W+++IAG             + +++ +  
Sbjct: 98  TALITMYARCRD-LELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSP 156

Query: 192 EEIAPNYVTMLGLISACTNLSSISHGRVVHGYVLKYGLIFELSIGNSLVNMYSKC 356
           E + P+ +T    + AC+ +  IS GR +    +  G   +  + N+L+NMYSKC
Sbjct: 157 EGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKC 211