BLASTX nr result

ID: Cnidium21_contig00043162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043162
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...    80   2e-13
emb|CBI22564.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002327574.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1|
            predicted protein [Populus trichocarpa]
          Length = 1087

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/104 (40%), Positives = 65/104 (62%)
 Frame = +1

Query: 7    DVFLKSMSKIKSEKIRTEALSLLIRLANGWRMPQQDKIISVMHVDVTLSLLSKKVDVHGI 186
            D F +S++++K+ +I  E LSLL +L+NGWR  Q  K  S+M      S L ++ +V G 
Sbjct: 895  DDFRRSVARVKNVRICKEVLSLLAKLSNGWRQRQSRKKRSLMVPSGISSPLIEQYNVSGQ 954

Query: 187  LQLIWIVDIIKEEGKWVQVVKVLDVLPKSKIREIKQNLKILFQN 318
            L ++W VDI++E   W+ V+KV D+LP S I ++  +L  LF N
Sbjct: 955  LNMVWTVDILQENSFWIHVLKVWDILPSSDIPKLAMSLDTLFWN 998


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = +1

Query: 7    DVFLKSMSKIKSEKIRTEALSLLIRLANGWRMPQQDKIISVMHVDVTLSLLSKKVDVHGI 186
            D F KS++KIK  +I  E L LL +L++GWR P  +KI +   +  T S L ++  V+G+
Sbjct: 955  DDFWKSLAKIKRTEINKEVLRLLEKLSSGWRSPNNEKIPNA--ITGTCSELFQQYKVNGL 1012

Query: 187  LQLIWIVDIIKEEGKWVQVVKVLDVLPKSKIREIKQNLKILFQN 318
            L L+W  DI KE     QV+KV D+LP+S+  ++ + L+ L  N
Sbjct: 1013 LDLVWTTDIFKENSNCTQVLKVWDILPRSETSKLARRLETLLGN 1056


>emb|CBI22564.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = +1

Query: 7    DVFLKSMSKIKSEKIRTEALSLLIRLANGWRMPQQDKIISVMHVDVTLSLLSKKVDVHGI 186
            D F KS++KIK  +I  E L LL +L++GWR P  +KI +   +  T S L ++  V+G+
Sbjct: 784  DDFWKSLAKIKRTEINKEVLRLLEKLSSGWRSPNNEKIPNA--ITGTCSELFQQYKVNGL 841

Query: 187  LQLIWIVDIIKEEGKWVQVVKVLDVLPKSKIREIKQNLKILFQN 318
            L L+W  DI KE     QV+KV D+LP+S+  ++ + L+ L  N
Sbjct: 842  LDLVWTTDIFKENSNCTQVLKVWDILPRSETSKLARRLETLLGN 885


>ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|222848215|gb|EEE85762.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = +1

Query: 7    DVFLKSMSKIKSEKIRTEALSLLIRLANGWRMPQQDKIISVMHVDVTLSLLSKKVDVHGI 186
            D F +S++++++ +I  E LSLL +L+NGWR     K  S+M      S L ++ +V G 
Sbjct: 848  DDFRRSVARVRNVRICKEVLSLLAKLSNGWRQHHSRKKRSLMVHSGISSPLIEQYNVSGQ 907

Query: 187  LQLIWIVDIIKEEGKWVQVVKVLDVLPKSKIREIKQNLKILFQN 318
            L +IW VDI++E    +QV+KV D+LP S I ++  +L  LF+N
Sbjct: 908  LNMIWTVDILQENSFCIQVLKVWDILPSSDIPKLAPSLDTLFRN 951


>ref|XP_002327574.1| predicted protein [Populus trichocarpa] gi|222836128|gb|EEE74549.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/102 (42%), Positives = 64/102 (62%)
 Frame = +1

Query: 13  FLKSMSKIKSEKIRTEALSLLIRLANGWRMPQQDKIISVMHVDVTLSLLSKKVDVHGILQ 192
           F KS+ K+++E  R E +SLL +L++GWR   +++II V H   T SLL +   V+  L 
Sbjct: 206 FRKSILKVRNEA-RQEVISLLSKLSSGWRESPEERIIVVRHG--TSSLLLEHYRVNDQLH 262

Query: 193 LIWIVDIIKEEGKWVQVVKVLDVLPKSKIREIKQNLKILFQN 318
           LIW VDIIKE     Q++KV DVLP   + ++ ++L  +F N
Sbjct: 263 LIWTVDIIKENSNHTQILKVWDVLPLPDLPKLARHLDDVFGN 304


Top