BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043157
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   139   2e-31
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   135   5e-30
ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...   127   1e-27
ref|NP_187457.1| RNA recognition motif-containing protein [Arabi...   123   1e-26

>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/106 (66%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
 Frame = +2

Query: 191 PPIN-KLFVAGLSWSVDEKTLKDAFASFGEITEVRIMYDKETGRSRGFGFVYFXXXXXXX 367
           PP N KLFVAGLSWSVDEK+LKDAF+SFG++TEVRIMYDK++GRSRGFGFVYF       
Sbjct: 34  PPSNTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDAR 93

Query: 368 XXXXXXXXXXYLGRPLRISYALEKVRGGPVVVPRLANSGIANARKN 505
                     +LGRPLR+SYALEKVRGGP+VVPR  N G  N  +N
Sbjct: 94  SAKDAMDGKAFLGRPLRVSYALEKVRGGPIVVPRRLNGGDDNNSRN 139


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/105 (64%), Positives = 82/105 (78%)
 Frame = +2

Query: 191 PPINKLFVAGLSWSVDEKTLKDAFASFGEITEVRIMYDKETGRSRGFGFVYFXXXXXXXX 370
           PP +KLFVAGLSWSVDEK+LKDAF+SFGE++EVRIMYDK++GRSRGFGFV F        
Sbjct: 22  PPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVC 81

Query: 371 XXXXXXXXXYLGRPLRISYALEKVRGGPVVVPRLANSGIANARKN 505
                     LGRPLRIS+ALEKVRGGP+VVPRL+++G  N+ +N
Sbjct: 82  AKDAMDGKALLGRPLRISFALEKVRGGPIVVPRLSSAG-DNSNRN 125


>ref|XP_002321147.1| predicted protein [Populus trichocarpa] gi|222861920|gb|EEE99462.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/95 (67%), Positives = 72/95 (75%)
 Frame = +2

Query: 200 NKLFVAGLSWSVDEKTLKDAFASFGEITEVRIMYDKETGRSRGFGFVYFXXXXXXXXXXX 379
           NKLFVAGLSWSVDEK+LKDAF+SFG++TEV I+YD+ +GRSRGFGFV F           
Sbjct: 18  NKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKD 77

Query: 380 XXXXXXYLGRPLRISYALEKVRGGPVVVPRLANSG 484
                  LGRPLRISYALE+VRGGPVVVPRL N G
Sbjct: 78  AMDGKALLGRPLRISYALERVRGGPVVVPRLPNGG 112


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/95 (66%), Positives = 74/95 (77%)
 Frame = +2

Query: 194 PINKLFVAGLSWSVDEKTLKDAFASFGEITEVRIMYDKETGRSRGFGFVYFXXXXXXXXX 373
           P NKLFVAGLSWS+DE++LKDAF+SFGE+TEVRI+YDK++GRSRGFGFV F         
Sbjct: 42  PNNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCA 101

Query: 374 XXXXXXXXYLGRPLRISYALEKVRGGPVVVPRLAN 478
                    LGRPLRIS+AL+KVRG PVVVPRL+N
Sbjct: 102 KDAMDGKAVLGRPLRISFALDKVRGEPVVVPRLSN 136


>ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|6648212|gb|AAF21210.1|AC013483_34 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis
           thaliana] gi|46359799|gb|AAS88763.1| At3g08000
           [Arabidopsis thaliana] gi|332641108|gb|AEE74629.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 143

 Score =  123 bits (309), Expect = 1e-26
 Identities = 70/138 (50%), Positives = 82/138 (59%)
 Frame = +2

Query: 68  MKNTLMLLGKRMGVIAVKNKPQCXXXXXXXXXXXXXXXXXXPPINKLFVAGLSWSVDEKT 247
           MKN + LL +R+  I     PQ                    P +KLF+ GLSWSVDE++
Sbjct: 2   MKNGIELLVRRVSAI-----PQHSISSSFHFLPQFCTSSSASPSSKLFIGGLSWSVDEQS 56

Query: 248 LKDAFASFGEITEVRIMYDKETGRSRGFGFVYFXXXXXXXXXXXXXXXXXYLGRPLRISY 427
           LKDAF+SFGE+ EVRI YDK +GRSRGFGFV F                  LGRPLRIS+
Sbjct: 57  LKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISF 116

Query: 428 ALEKVRGGPVVVPRLANS 481
           ALE+VRGGPVVVPRL  S
Sbjct: 117 ALERVRGGPVVVPRLGKS 134