BLASTX nr result
ID: Cnidium21_contig00043148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00043148 (365 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315787.1| chromatin remodeling complex subunit [Populu... 71 1e-12 ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica... 75 5e-12 ref|XP_002517204.1| ATP binding protein, putative [Ricinus commu... 71 6e-12 ref|XP_002281240.2| PREDICTED: transcription regulatory protein ... 74 9e-12 emb|CBI26213.3| unnamed protein product [Vitis vinifera] 74 9e-12 >ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864827|gb|EEF01958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1132 Score = 70.9 bits (172), Expect(2) = 1e-12 Identities = 31/51 (60%), Positives = 38/51 (74%) Frame = -1 Query: 317 NTKYWLHKNYACPEKQLFDWGTMLLRRPPYGVGEAFAMEANINMKKKRDVE 165 N++YWL N P+KQLFDWG M L RP YG+G+AFAMEA+ +KKRD E Sbjct: 164 NSEYWLRLNCMFPDKQLFDWGMMRLPRPLYGIGDAFAMEADDQFRKKRDAE 214 Score = 26.6 bits (57), Expect(2) = 1e-12 Identities = 11/17 (64%), Positives = 16/17 (94%) Frame = -3 Query: 363 KLAQLQNKVWSDVNTKY 313 KLA+LQ+KV S+VN++Y Sbjct: 151 KLAELQSKVQSEVNSEY 167 >ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula] gi|355512013|gb|AES93636.1| Chromatin remodeling complex subunit [Medicago truncatula] Length = 1063 Score = 75.1 bits (183), Expect = 5e-12 Identities = 31/51 (60%), Positives = 42/51 (82%) Frame = -1 Query: 317 NTKYWLHKNYACPEKQLFDWGTMLLRRPPYGVGEAFAMEANINMKKKRDVE 165 +++YWL+ N A P+KQLFDWG M LRRPPYG+G+ FAM+A+ ++KKRD E Sbjct: 125 SSEYWLNVNCAYPDKQLFDWGMMRLRRPPYGIGDPFAMDADDQIRKKRDAE 175 >ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis] gi|223543839|gb|EEF45367.1| ATP binding protein, putative [Ricinus communis] Length = 1079 Score = 71.2 bits (173), Expect(2) = 6e-12 Identities = 32/51 (62%), Positives = 38/51 (74%) Frame = -1 Query: 317 NTKYWLHKNYACPEKQLFDWGTMLLRRPPYGVGEAFAMEANINMKKKRDVE 165 N++YWL A P+KQLFDWG M LRRP YGVG+AFA EA+ +KKRD E Sbjct: 160 NSEYWLRLKCASPDKQLFDWGMMRLRRPLYGVGDAFAPEADDQFRKKRDAE 210 Score = 23.9 bits (50), Expect(2) = 6e-12 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -3 Query: 363 KLAQLQNKVWSDVNTKY 313 KLA LQ KV ++VN++Y Sbjct: 147 KLADLQRKVRTEVNSEY 163 >ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis vinifera] Length = 1114 Score = 74.3 bits (181), Expect = 9e-12 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = -1 Query: 317 NTKYWLHKNYACPEKQLFDWGTMLLRRPPYGVGEAFAMEANINMKKKRDVE 165 +++YWL N A P+KQLFDWG M LRRP YGVG+AFAMEA+ +KKRD E Sbjct: 165 SSEYWLRMNCAYPDKQLFDWGMMRLRRPLYGVGDAFAMEADDQFRKKRDAE 215 >emb|CBI26213.3| unnamed protein product [Vitis vinifera] Length = 1110 Score = 74.3 bits (181), Expect = 9e-12 Identities = 33/51 (64%), Positives = 40/51 (78%) Frame = -1 Query: 317 NTKYWLHKNYACPEKQLFDWGTMLLRRPPYGVGEAFAMEANINMKKKRDVE 165 +++YWL N A P+KQLFDWG M LRRP YGVG+AFAMEA+ +KKRD E Sbjct: 154 SSEYWLRMNCAYPDKQLFDWGMMRLRRPLYGVGDAFAMEADDQFRKKRDAE 204