BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043123
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    66   3e-09
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    65   4e-09
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    65   4e-09
emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]            65   6e-09

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = +3

Query: 6   DGNHKIQTPRPPNCQLQRVSDLLQENGL-WDWNLIKSIFNQRDCNLIASIPRSSRVTEDK 182
           + N  + +  P   +   V+ +LQ N   WD +++  +FN RD  LI SIP ++R  ED 
Sbjct: 337 NANGMVSSEIPEGLEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDS 396

Query: 183 WIWRLDNKGVYTIKLGYKTLRNHSSFSSIAYPTFKWSMIWNQRVPAKVQNCM 338
           W W  D+KG Y +K  Y+ L+        ++    W+  W  ++P KV+N M
Sbjct: 397 WYWLFDDKGNYLVKNCYRLLQGDLGRPETSF----WNKFWKLKIPTKVRNLM 444


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = +3

Query: 12  NHKIQTPRPPNCQLQRVSDLLQENGL-WDWNLIKSIFNQRDCNLIASIPRSSRVTEDKWI 188
           +HK  TP P + +   V+ LL   GL W+  ++ SIFN +D   I SIP  +R+  D  I
Sbjct: 22  SHKPSTPMPAHHEDLTVNYLLNLEGLSWNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRI 81

Query: 189 WRLDNKGVYTIKLGYKTLRNHSSFSSIAYPTFKWSMIWNQRVPAKVQNCMCR 344
           W+    G YT+K  Y+   +       A+    W  IWN  +P +V+  + R
Sbjct: 82  WKTTTTGNYTVKSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWR 133


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
 Frame = +3

Query: 42   NCQLQRVSDLLQENGLWDWNLIKSIFNQRDCNLIASIPRSSRVTEDKWIWRLDNKGVYTI 221
            NC+++ V+DL+ +NG+WD N I  IF   D  +I  +  SSR  ED   W  D  G +++
Sbjct: 1323 NCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSV 1382

Query: 222  KLGYKTLRN-----HSSFSSIAYPTFKWSMIWNQRVPAKVQ 329
            +  Y+   N      SS SS       W ++W   VP+KV+
Sbjct: 1383 RTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVK 1423


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
 Frame = +3

Query: 42   NCQLQRVSDLLQENGLWDWNLIKSIFNQRDCNLIASIPRSSRVTEDKWIWRLDNKGVYTI 221
            NC+++ V+DL+ +NG+WD N I  IF   D  +I  +  SSR  ED   W  D  G +++
Sbjct: 1351 NCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILKLRTSSRDEEDFIAWHPDKLGNFSV 1410

Query: 222  KLGYKTLRN-----HSSFSSIAYPTFKWSMIWNQRVPAKVQ 329
            +  Y+   N      SS SS       W ++W   VP+KV+
Sbjct: 1411 RTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVK 1451


>emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
          Length = 611

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
 Frame = +3

Query: 42  NCQLQRVSDLLQENGLWDWNLIKSIFNQRDCNLIASIPRSSRVTEDKWIWRLDNKGVYTI 221
           NC+ + V+DL+  +G WD  ++K IF   D  LI +I  S+R  ED   W  D  GV+++
Sbjct: 195 NCRTKWVADLMGVDGTWDEQVVKRIFWPMDAELILTIRLSARAEEDFLAWHPDKWGVFSV 254

Query: 222 KLGYK-----TLRNHSSFSSIAYPTFKWSMIWNQRVPAKVQ 329
           +  YK        ++ S SS A  +  W+++W   VP KV+
Sbjct: 255 RSAYKLALQLAAIDNGSGSSEAETSKAWNLVWKCNVPQKVK 295