BLASTX nr result

ID: Cnidium21_contig00043115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043115
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA61624.1| hypothetical protein AP9_D05.1 [Arabidopsis lyrat...    72   5e-11
emb|CAB91581.1| putative protein [Arabidopsis thaliana]                71   8e-11
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]           70   2e-10
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...    70   2e-10
gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza...    69   5e-10

>gb|ACA61624.1| hypothetical protein AP9_D05.1 [Arabidopsis lyrata subsp. petraea]
          Length = 800

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/92 (41%), Positives = 58/92 (63%)
 Frame = -1

Query: 288 LPVLPNKGRADIVMASINSSYLWDDFVVFKLDQNMRIESGVPPVTISGQTIPYADWVVNV 109
           LPV+ N GRA+IVM+S+NSSYLWD   V KL +NMR+ +       + +   ++DW++ V
Sbjct: 471 LPVITNAGRAEIVMSSLNSSYLWDHCKVLKLTKNMRLLNNSLSAQEAKEIQEFSDWLLAV 530

Query: 108 GDGKVNTVSSTDEGESCWIEIPPELFLDPKSN 13
           GDG++N     ++GE   I+IP +L +    N
Sbjct: 531 GDGRIN---EPNDGEVV-IDIPEDLLITEAEN 558


>emb|CAB91581.1| putative protein [Arabidopsis thaliana]
          Length = 1752

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/92 (41%), Positives = 58/92 (63%)
 Frame = -1

Query: 288  LPVLPNKGRADIVMASINSSYLWDDFVVFKLDQNMRIESGVPPVTISGQTIPYADWVVNV 109
            LPV+   GR +IVM+S+N+SYLWD   V KL +NMR+ SG      + +   ++DW++ V
Sbjct: 1423 LPVINGAGRVEIVMSSLNASYLWDHCKVLKLTKNMRLLSGGLSSEEAKEIQQFSDWLLAV 1482

Query: 108  GDGKVNTVSSTDEGESCWIEIPPELFLDPKSN 13
            GDG++N     ++GE+  I+IP EL +    N
Sbjct: 1483 GDGRIN---EPNDGEAL-IDIPEELLIKEAGN 1510


>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
          Length = 1428

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/92 (41%), Positives = 58/92 (63%)
 Frame = -1

Query: 288  LPVLPNKGRADIVMASINSSYLWDDFVVFKLDQNMRIESGVPPVTISGQTIPYADWVVNV 109
            LPV+   GRA+IVM+S+N+SYLWD   V +L +NMR+ +    V  + +   ++DW++ V
Sbjct: 1100 LPVINGAGRAEIVMSSLNASYLWDHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAV 1159

Query: 108  GDGKVNTVSSTDEGESCWIEIPPELFLDPKSN 13
            GDG+VN     ++GE   I+IP EL +    N
Sbjct: 1160 GDGRVN---EPNDGEVI-IDIPEELLIQEADN 1187


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = -1

Query: 288  LPVLPNKGRADIVMASINSSYLWDDFVVFKLDQNMRIESGVPPVTISGQTIPYADWVVNV 109
            LPV+    R  IV ASI  SYLW  F +FKL +NMR+           +T  +A W+VN+
Sbjct: 1359 LPVVRKGRRTQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWIVNI 1418

Query: 108  GDGKVNTVSSTDEGESCWIEIPPELFL----DPK 19
            GDGK    +++ +GE  WIEIP +L L    DPK
Sbjct: 1419 GDGK----TTSADGEE-WIEIPDDLILKKGGDPK 1447


>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1618

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = -1

Query: 288  LPVLPNKGRADIVMASINSSYLWDDFVVFKLDQNMRIESGVPPVTISGQTIPYADWVVNV 109
            LPV+    R  IV ASI  SYLW  F +FKL +NMR+           +T  +A W++N+
Sbjct: 1295 LPVVRKGRRTQIVNASIKRSYLWQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNI 1354

Query: 108  GDGKVNTVSSTDEGESCWIEIPPELFL----DPK 19
            GDGK    +++ +GE  WIEIP +L L    DPK
Sbjct: 1355 GDGK----TTSADGEE-WIEIPDDLILKKGGDPK 1383


Top