BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043097
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    45   5e-08
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    46   4e-07
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    45   8e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    42   1e-06
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    42   1e-06

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 45.1 bits (105), Expect(2) = 5e-08
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
 Frame = +1

Query: 163 NSSDDSCEIILGFDLGTEQFREVPFPAGDGTFVDYNCKRLF-NVGV---SLCILDNYL-Y 327
           N   +   I++  DLG E +REV  P       +Y  K  + ++GV    LC L N+L  
Sbjct: 221 NPESNVANIVVALDLGVEDYREVLQP-------EYKDKNFYIDLGVLRGCLCFLANFLGE 273

Query: 328 LMDLYVMNSYGAENSWHKAFSV 393
            +D+++M  YG + SW K FSV
Sbjct: 274 RVDVWMMKEYGVKESWTKLFSV 295



 Score = 37.0 bits (84), Expect(2) = 5e-08
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +2

Query: 47  VIVYSMNTNSWTRIKDIPRKIRSASSWGMFASGALH 154
           V VYS+   SW RI D+P  +    + G+FA+GALH
Sbjct: 180 VKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALH 215


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 46.2 bits (108), Expect(2) = 4e-07
 Identities = 25/70 (35%), Positives = 37/70 (52%)
 Frame = +1

Query: 184 EIILGFDLGTEQFREVPFPAGDGTFVDYNCKRLFNVGVSLCILDNYLYLMDLYVMNSYGA 363
           ++I+ FDL  E F EVP P       D     L   G  LC++++     D++VM  YG+
Sbjct: 216 DLIVSFDLTRETFHEVPLPVTVNGDFDMQVALL---GGCLCVVEHRGTGFDVWVMRVYGS 272

Query: 364 ENSWHKAFSV 393
            NSW K F++
Sbjct: 273 RNSWEKLFTL 282



 Score = 32.7 bits (73), Expect(2) = 4e-07
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +2

Query: 47  VIVYSMNTNSWTRIKDIPRKIRSASSWGMFASGALHCQLT 166
           V +Y++ ++SW  +  +P  +  A + G+F SG+LH  +T
Sbjct: 168 VQLYTLKSDSWKNLPSMPYALCCARTMGVFVSGSLHWLVT 207


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 45.1 bits (105), Expect(2) = 8e-07
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = +1

Query: 175 DSCEIILGFDLGTEQFREVPFPAGDGTFVDYNCKRLFNVGVSLCILDNYLYLMDLYVMNS 354
           D  ++I+ FDL +E F EVP PA      D     L   G  LC++++      ++VM  
Sbjct: 213 DEPDLIVAFDLTSETFCEVPLPATVNGNFDMQVALL---GGCLCVVEHRGTGFHVWVMRV 269

Query: 355 YGAENSWHKAFSV 393
           YG+ +SW K FS+
Sbjct: 270 YGSRDSWEKLFSL 282



 Score = 32.7 bits (73), Expect(2) = 8e-07
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +2

Query: 47  VIVYSMNTNSWTRIKDIPRKIRSASSWGMFASGALHCQLT 166
           V +Y++ ++SW  +  +P  +  A + G+F SG+LH  +T
Sbjct: 168 VQLYTLKSDSWKNLPSMPYALCCARTMGVFVSGSLHWLVT 207


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = +1

Query: 184 EIILGFDLGTEQFREVPFPAGDGTFVDYNCKRLFNVGVSLCILDNYLYL----MDLYVMN 351
           + I+  DLG E +  VP P     FVD NC     VGV    L    Y     +D++VM 
Sbjct: 221 DTIVALDLGVEDYHVVPKPE----FVDMNCN--MGVGVLQGCLSLLAYARSERVDVWVME 274

Query: 352 SYGAENSWHKAFSV 393
            Y  + SW K FSV
Sbjct: 275 EYMVKESWSKLFSV 288



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +2

Query: 47  VIVYSMNTNSWTRIKDIPRKIRSASSWGMFASGALH 154
           V V+S+  NSW RI D+P  +      G++A+GALH
Sbjct: 173 VKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALH 208


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = +1

Query: 175 DSCEIILGFDLGTEQFREVPFPAG-DGTFVDYNCKRLFNVGVSLCILDNY-LYLMDLYVM 348
           +S ++I+ FDL  E FREV  P   DG F D +   L  +   LCI++N      D++VM
Sbjct: 219 ESRDLIVAFDLRFEVFREVALPGTVDGKF-DMDVALLRGM---LCIIENRGSDGFDVWVM 274

Query: 349 NSYGAENSWHKAFSV 393
             YG+ +SW K F+V
Sbjct: 275 REYGSHDSWCKMFTV 289



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 47  VIVYSMNTNSWTRIKDIPRKIRSASSWGMFASGALHCQLT 166
           V +Y+M T+ W  +  +P  +  A + G+F SGALH  +T
Sbjct: 174 VKIYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVT 213