BLASTX nr result

ID: Cnidium21_contig00043074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043074
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         172   3e-41
emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]   170   1e-40
emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]   170   1e-40
emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]   169   2e-40
emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera]   169   3e-40

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/122 (67%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FINQAKYTRNLLKKFGMLDCSSATTPMATATKLDKDT-GASVDMTSYRGMIGSLLYLTAS 187
           FINQ+KY ++LLKKF   +CSS  TPMA   KL+ D  G SV++TSYRGMIGSLLYLTAS
Sbjct: 135 FINQSKYVKDLLKKFDFNECSSMKTPMAPPLKLNADPDGKSVNVTSYRGMIGSLLYLTAS 194

Query: 186 IPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLLGYSDADFA 7
            PDIM++TCLCAR+QA+P+E HL AVKRIF+YLKGT  LGLWYP++S F L G+SD+++A
Sbjct: 195 RPDIMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFSDSNYA 254

Query: 6   GC 1
           GC
Sbjct: 255 GC 256


>emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]
          Length = 900

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/122 (66%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FINQAKYTRNLLKKFGMLDCSSATTPMATATKLDKDT-GASVDMTSYRGMIGSLLYLTAS 187
           FINQAKY R+LLK+F M    +  TPM+++ KLDKD  G  +D T YRGMIGSLLYLTAS
Sbjct: 203 FINQAKYIRDLLKRFNMEAAKTMKTPMSSSIKLDKDEKGKFIDSTMYRGMIGSLLYLTAS 262

Query: 186 IPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLLGYSDADFA 7
            PDIMY+ CLCARFQ+ P+E HL+AVKRI +YLKGT+ +GLWYP+  +F+L+GYSDADFA
Sbjct: 263 RPDIMYSVCLCARFQSCPKESHLSAVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFA 322

Query: 6   GC 1
           GC
Sbjct: 323 GC 324


>emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]
          Length = 669

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/122 (65%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FINQAKYTRNLLKKFGMLDCSSATTPMATATKLDKDT-GASVDMTSYRGMIGSLLYLTAS 187
           FINQAKY ++LLK+F M +  +  TPM+++ KLDKD  G S+D T YRGMIGSLLYLTAS
Sbjct: 192 FINQAKYIKDLLKRFNMEEAKTMKTPMSSSIKLDKDEKGKSIDSTMYRGMIGSLLYLTAS 251

Query: 186 IPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLLGYSDADFA 7
            P+IMY+ CLCARFQ+  +E HL+AVKRIF+YLKGTI +GLWYP+  +F+L+G+SDADFA
Sbjct: 252 RPNIMYSVCLCARFQSCLKESHLSAVKRIFRYLKGTIDIGLWYPKSDNFELIGFSDADFA 311

Query: 6   GC 1
           GC
Sbjct: 312 GC 313


>emb|CAN67988.1| hypothetical protein VITISV_017211 [Vitis vinifera]
          Length = 1119

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/122 (64%), Positives = 98/122 (80%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363  FINQAKYTRNLLKKFGMLDCSSATTPMATATKLDKDT-GASVDMTSYRGMIGSLLYLTAS 187
            FINQAKY R+LLK+F M +  +  TPM+++ KLDKD  G S+D T YRGMIGSLLYLTAS
Sbjct: 726  FINQAKYIRDLLKRFNMXEAKTMKTPMSSSIKLDKDEKGKSIDSTMYRGMIGSLLYLTAS 785

Query: 186  IPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLLGYSDADFA 7
             PDIMY+ CLCARFQ+ P+E HL+ VK I +YLKGT+ +GLWYP+  +F+L+GYSDADFA
Sbjct: 786  XPDIMYSVCLCARFQSCPKESHLSVVKXILRYLKGTMDIGLWYPKGDNFELIGYSDADFA 845

Query: 6    GC 1
             C
Sbjct: 846  SC 847


>emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera]
          Length = 334

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/122 (65%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FINQAKYTRNLLKKFGMLDCSSATTPMATATKLDKDT-GASVDMTSYRGMIGSLLYLTAS 187
           FINQ KY R+LLK+F M +  +  TPM+++ KLDKD  G S+D T YRGMIGSLLYLTAS
Sbjct: 71  FINQPKYIRDLLKRFNMEEAKTMKTPMSSSIKLDKDEKGKSIDSTMYRGMIGSLLYLTAS 130

Query: 186 IPDIMYATCLCARFQADPREPHLTAVKRIFKYLKGTITLGLWYPRESDFKLLGYSDADFA 7
            PDIM + CLCARFQ+ P+E HL+AVKRI +YLKGT+ +GLWYP+  +F+L+GYSDADFA
Sbjct: 131 RPDIMNSVCLCARFQSCPKESHLSAVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFA 190

Query: 6   GC 1
           GC
Sbjct: 191 GC 192


Top