BLASTX nr result

ID: Cnidium21_contig00043062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043062
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   112   2e-23
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   112   2e-23
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   110   1e-22
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   107   8e-22

>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
           predicted protein [Populus trichocarpa]
          Length = 1791

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   LTWMYPHVFEENVLDNIKGWVLNDPSRSSCEDPNLNTDCGQRKSSDAEMLKTYSTXXXXX 182
           LTW+YPHVFE+ V++NIK WV+++ +R   ED N   D  +++ SD+EMLKTYST     
Sbjct: 62  LTWIYPHVFEDPVMENIKAWVMDEATRFPSEDRNWKHDMERKEGSDSEMLKTYSTGLLAV 121

Query: 183 XXXXXXQIVEDVLTSGLSAKLMRYLRIQTLGE--TSKKDAN 299
                 QIVEDVLTSGLSAKLMRYLRI+ LGE   S+KDA+
Sbjct: 122 GLASGGQIVEDVLTSGLSAKLMRYLRIRVLGEASASQKDAS 162


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
           homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/99 (55%), Positives = 69/99 (69%)
 Frame = +3

Query: 3   LTWMYPHVFEENVLDNIKGWVLNDPSRSSCEDPNLNTDCGQRKSSDAEMLKTYSTXXXXX 182
           LTW YPHVFEE+VL+NIK WV+ +  +SS ED N   + G +  SD+EMLKTYST     
Sbjct: 154 LTWTYPHVFEEDVLENIKKWVMEEAGKSSAEDRNWKPELGGKDVSDSEMLKTYSTGLLAV 213

Query: 183 XXXXXXQIVEDVLTSGLSAKLMRYLRIQTLGETSKKDAN 299
                 Q+VEDV T+ LSAKLMR+LRI+ LG+ S+KD N
Sbjct: 214 CLAGGSQLVEDVFTARLSAKLMRFLRIRVLGDVSQKDGN 252


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
           sativus]
          Length = 1915

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/99 (55%), Positives = 69/99 (69%)
 Frame = +3

Query: 3   LTWMYPHVFEENVLDNIKGWVLNDPSRSSCEDPNLNTDCGQRKSSDAEMLKTYSTXXXXX 182
           LTW YPHVFEE+VL+NIK WV+ +  +SS ED N   + G +  SD+EMLKTYST     
Sbjct: 149 LTWTYPHVFEEDVLENIKKWVMEEAGKSSAEDRNWKPELGGKDVSDSEMLKTYSTGLLAV 208

Query: 183 XXXXXXQIVEDVLTSGLSAKLMRYLRIQTLGETSKKDAN 299
                 Q+VEDV T+ LSAKLMR+LRI+ LG+ S+KD N
Sbjct: 209 CLAGGSQLVEDVFTARLSAKLMRFLRIRVLGDVSQKDGN 247


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   LTWMYPHVFEENVLDNIKGWVLNDPSRSSCEDPNLNTDCGQRKS-SDAEMLKTYSTXXXX 179
           LTW+YPHVFEE+V++NIK WV++D +    E+ NL  + G+ ++ SD+EMLKTYST    
Sbjct: 124 LTWIYPHVFEESVMENIKNWVMDDNTGLPAEEQNLRHNPGRSEAASDSEMLKTYSTGLLA 183

Query: 180 XXXXXXXQIVEDVLTSGLSAKLMRYLRIQTLGETS 284
                  QIVEDVLTSGLSAKLMRYLRI  LGETS
Sbjct: 184 VCLDGQGQIVEDVLTSGLSAKLMRYLRISVLGETS 218


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/100 (56%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   LTWMYPHVFEENVLDNIKGWVLNDPSRSSCEDPNLNTDCGQRKSSDAEMLKTYSTXXXXX 182
           LTW+YPHVFEE V++NIK WV+++ +RS  E+ +   D G++++SD+EMLK YST     
Sbjct: 147 LTWIYPHVFEEPVIENIKNWVMDETARSG-EERHWKHDTGKKEASDSEMLKCYSTGLLAV 205

Query: 183 XXXXXXQIVEDVLTSGLSAKLMRYLRIQTLGETS--KKDA 296
                 Q+VEDVLTSGLSAKLMR+LRI+ L ETS  +KDA
Sbjct: 206 CLAGGGQVVEDVLTSGLSAKLMRFLRIRVLAETSTNQKDA 245


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