BLASTX nr result

ID: Cnidium21_contig00043011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00043011
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...   177   1e-42
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   173   1e-41
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   171   6e-41
gb|AEO32741.1| hypothetical protein [Amblyomma maculatum]             168   5e-40

>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  184 bits (466), Expect = 8e-45
 Identities = 86/106 (81%), Positives = 98/106 (92%)
 Frame = +3

Query: 45  HDSGDVVNPGNNLYVMGLSTRVTSSDLEKFFSNEGKVTDCHLVKDPQTKESRGFAFVTME 224
           +DSGD  NPGNNLYV GLSTRVTSSDLEK+FS+EGKV +CHLV DP+T+ESRGFAFVTME
Sbjct: 38  NDSGDASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTME 97

Query: 225 TNEDAERCIKHLNRTVLEGRLVTVEKAKRKRGRTPTPGRYQGAKDK 362
           T EDA RC+K+LNR+VLEGR++TVEKAKRKRGRTPTPGRYQG +DK
Sbjct: 98  TVEDANRCVKYLNRSVLEGRVITVEKAKRKRGRTPTPGRYQGLRDK 143


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Glycine max]
          Length = 191

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/105 (79%), Positives = 91/105 (86%)
 Frame = +3

Query: 48  DSGDVVNPGNNLYVMGLSTRVTSSDLEKFFSNEGKVTDCHLVKDPQTKESRGFAFVTMET 227
           DS DV NPGNNLYV GLSTR+T SDL K+FS EGKV DCHLVKDP TKESRGF FVTMET
Sbjct: 37  DSADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMET 96

Query: 228 NEDAERCIKHLNRTVLEGRLVTVEKAKRKRGRTPTPGRYQGAKDK 362
           N+DAE CIK+LNR+V EGRL+TVEKAKR RGRTPTPG+Y G +DK
Sbjct: 97  NDDAECCIKYLNRSVFEGRLITVEKAKRNRGRTPTPGKYCGPRDK 141


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/105 (76%), Positives = 95/105 (90%)
 Frame = +3

Query: 48  DSGDVVNPGNNLYVMGLSTRVTSSDLEKFFSNEGKVTDCHLVKDPQTKESRGFAFVTMET 227
           DS D VNPGNNLYV GLSTRV +SDLEK+F++EGKV +CHLV DP+T+ESRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 228 NEDAERCIKHLNRTVLEGRLVTVEKAKRKRGRTPTPGRYQGAKDK 362
            EDA+RCIK+LNR+VLEGRL+TVEKAKR+RGRTPTPGRY G +++
Sbjct: 105 VEDADRCIKYLNRSVLEGRLITVEKAKRRRGRTPTPGRYHGLRER 149


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = +3

Query: 51  SGDVVNPGNNLYVMGLSTRVTSSDLEKFFSNEGKVTDCHLVKDPQTKESRGFAFVTMETN 230
           S D  NPGNNLYV GLSTRVT+ DLEK+F  EGKV +CHLV DP+T+ESRGFAFVTMET 
Sbjct: 39  SVDAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETL 98

Query: 231 EDAERCIKHLNRTVLEGRLVTVEKAKRKRGRTPTPGRYQGAKDK 362
           EDAERC+K+LNR+VLEGRL+TVEKAKR+RGRTPTPGRY G +++
Sbjct: 99  EDAERCVKYLNRSVLEGRLITVEKAKRRRGRTPTPGRYHGLRER 142


>gb|AEO32741.1| hypothetical protein [Amblyomma maculatum]
          Length = 212

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/105 (74%), Positives = 93/105 (88%)
 Frame = +3

Query: 48  DSGDVVNPGNNLYVMGLSTRVTSSDLEKFFSNEGKVTDCHLVKDPQTKESRGFAFVTMET 227
           DSG   NPGNNLY+ GLSTRVTSSDLE++FS EGKV +C +V DP+++ESRGFAFVTMET
Sbjct: 45  DSGHASNPGNNLYITGLSTRVTSSDLEEYFSKEGKVRECEVVLDPRSRESRGFAFVTMET 104

Query: 228 NEDAERCIKHLNRTVLEGRLVTVEKAKRKRGRTPTPGRYQGAKDK 362
            EDA+RC+KHLNR+VLEGRL+TVEKAKRK GRTPTPG Y G++D+
Sbjct: 105 VEDADRCVKHLNRSVLEGRLITVEKAKRKCGRTPTPGYYYGSRDR 149


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