BLASTX nr result

ID: Cnidium21_contig00042981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042981
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like ...    86   3e-15
ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like ...    84   1e-14
ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002514070.1| Ran GTPase binding protein, putative [Ricinu...    83   3e-14
emb|CBI27840.3| unnamed protein product [Vitis vinifera]               82   5e-14

>ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/64 (62%), Positives = 53/64 (82%)
 Frame = -1

Query: 199 QSSRTITSQIKDMALKASGAYRNCTPCTGPVTQQPQRQKSFSESDSGSDKFRWSYRRTAS 20
           Q+ +++TSQI+DMALKASGAY++C PCTGP TQ   R  + +ESD+ SD+FRWSYRRT S
Sbjct: 26  QAVKSLTSQIRDMALKASGAYKHCAPCTGPATQGRFRSNT-TESDADSDRFRWSYRRTGS 84

Query: 19  SNSS 8
           S+S+
Sbjct: 85  SSST 88


>ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/64 (60%), Positives = 52/64 (81%)
 Frame = -1

Query: 199 QSSRTITSQIKDMALKASGAYRNCTPCTGPVTQQPQRQKSFSESDSGSDKFRWSYRRTAS 20
           Q+ +++TSQI+DMALKASGAY++C PCTGP TQ   R  + +E D+ SD+FRWSYRRT S
Sbjct: 26  QAIKSLTSQIRDMALKASGAYKHCAPCTGPATQGRVRSNA-TELDADSDRFRWSYRRTGS 84

Query: 19  SNSS 8
           S+S+
Sbjct: 85  SSST 88


>ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|222855175|gb|EEE92722.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/105 (46%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = -1

Query: 319 ISRSKQPXXXXXXXXXXXXXDQQIKFSDRIPPIHPNTKLQQSSRTITSQIKDMALKASGA 140
           I+RSKQP              QQ              + QQ+ +++TSQ+KDMALKASGA
Sbjct: 5   IARSKQPAATTANHHPSAAKQQQ--------------QQQQAIKSLTSQLKDMALKASGA 50

Query: 139 YRNCTPCTGPVTQQPQRQKSFS-ESDSGSDKFRWSYRRTASSNSS 8
           YR+C PCT P T    R +S S ESD+ S+KFRWS RRT SS+S+
Sbjct: 51  YRHCNPCTAPNTTTQSRLRSNSTESDAESEKFRWSLRRTGSSSST 95


>ref|XP_002514070.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223546526|gb|EEF48024.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 403

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/69 (56%), Positives = 53/69 (76%)
 Frame = -1

Query: 214 NTKLQQSSRTITSQIKDMALKASGAYRNCTPCTGPVTQQPQRQKSFSESDSGSDKFRWSY 35
           N K  Q+ +++TSQ++DMALKASGAYR+C PCT P +Q   R  S +ESD+ S++FRWS 
Sbjct: 32  NAKQHQAIKSLTSQLRDMALKASGAYRHCNPCTAPTSQNRFRNSS-NESDAESERFRWSL 90

Query: 34  RRTASSNSS 8
           RRT SS+S+
Sbjct: 91  RRTGSSSST 99


>emb|CBI27840.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
 Frame = -1

Query: 217 PNTKLQQSSRTITSQIKDMALKASGAYRNCTPCTGPVTQQPQRQKSFSESD--SGSDKFR 44
           P TK QQS + +T QIKDMALKA+GAYRNC PC+  V  Q    +S++ESD  S S++FR
Sbjct: 28  PGTK-QQSIKALTCQIKDMALKATGAYRNCNPCSASVQHQ---SRSYAESDSASASERFR 83

Query: 43  WSYRRTASSNSS 8
           WSYRRT SS+S+
Sbjct: 84  WSYRRTGSSSST 95


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