BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042975
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...   167   6e-40
ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ...   156   1e-36
ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containin...   139   2e-31
ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containin...   139   2e-31

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Vitis vinifera]
          Length = 948

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/138 (59%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   LSPHDSASDPEEKEFSXXXXXXRNHKHRRRETQTHSLERDPV-QVSTRPYRNRNKPFENG 177
           LSP D  SDPEEKE S      RNHKHRRRET++ SLERD + QV +RPYR RNKPFENG
Sbjct: 13  LSPSDGESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQVLSRPYRKRNKPFENG 72

Query: 178 HPHREAASQSNETWRNYNMPPLDKDFPGKFDRRRPGSTPVSRSPLDLNQRGRGNQSWTGD 357
           H  RE  SQS+ +W+NYN+ P++KDF GKF++RRPG    +R+PLDLNQR R NQS++GD
Sbjct: 73  HSFRENDSQSSGSWKNYNISPMEKDFSGKFEKRRPGLATFARAPLDLNQRTRMNQSFSGD 132

Query: 358 PGSXXXXXXEFGSWAVRD 411
            G       + GSW  RD
Sbjct: 133 SGPVRGRGRDPGSWNQRD 150


>ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|222847276|gb|EEE84823.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/139 (57%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   LSPHDSASDPEEKEFSXXXXXXRNHKHRRRETQTHSLERDPVQ-VSTRPYRNRNKPFENG 177
           LSP +  SDPEEKE S      RNHKHRRRET++ SLERD ++ VSTRPYR  NK FENG
Sbjct: 13  LSPAECISDPEEKEVSDEEDDDRNHKHRRRETRSQSLERDSLEPVSTRPYRKHNKHFENG 72

Query: 178 HPHREAASQSNETWRNYNMPPLDKDFPGKFDRRRPGSTPVSRSPLDLNQRGRGNQSWTGD 357
           HP RE  SQ+ ETW+NYN   L+KD+  KF+R RP    + R P+DLNQR R NQ+++GD
Sbjct: 73  HPFRENESQARETWKNYNSVSLEKDYATKFERIRPDLMSLPRMPVDLNQRIRLNQTFSGD 132

Query: 358 PGSXXXXXXEFGSWAVRDS 414
           PG       E+GSW+ RDS
Sbjct: 133 PGPSRGRGREYGSWSQRDS 151


>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
           gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
           [Ricinus communis]
          Length = 972

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/139 (57%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   LSPHDSASDPEEKEFSXXXXXXRNHKHRRRETQTHSLERDPVQ-VSTRPYRNRNKPFENG 177
           LSP D ASDPEEKE S      RNHKHRRRET++ S ERD ++ + TR YR RNKPFENG
Sbjct: 13  LSPSDCASDPEEKEISDEDDDDRNHKHRRRETRSQSTERDSLEPIFTRSYRKRNKPFENG 72

Query: 178 HPHREAASQSNETWRNYNMPPLDKDFPGKFDRRRPGSTPVSRSPLDLNQRGRGNQSWTGD 357
           HP RE  SQ +ETW+N N+ PL+KDF  KFD+RRPG     R  +DLNQR R NQ + G+
Sbjct: 73  HPFRENESQGSETWKNSNIAPLEKDFI-KFDKRRPGMASFPRMNVDLNQRIRSNQIFFGE 131

Query: 358 PGSXXXXXXEFGSWAVRDS 414
           PG       + GSW  RDS
Sbjct: 132 PGPGRGRGRDSGSWNQRDS 150


>ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Cucumis sativus]
          Length = 800

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/134 (51%), Positives = 87/134 (64%)
 Frame = +1

Query: 13  DSASDPEEKEFSXXXXXXRNHKHRRRETQTHSLERDPVQVSTRPYRNRNKPFENGHPHRE 192
           D  SDPEEK+ S      RNHKHRRRET++ SLERD  +   RPY  R+KPFENG   R+
Sbjct: 15  DYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDAREHVLRPYGKRSKPFENGRSFRD 74

Query: 193 AASQSNETWRNYNMPPLDKDFPGKFDRRRPGSTPVSRSPLDLNQRGRGNQSWTGDPGSXX 372
             SQ+NE W+++N P L+KD PGKFD+RR G+ P  R   D NQR RGNQ+++GD  S  
Sbjct: 75  NDSQANEAWKSFNAPTLEKDTPGKFDKRRLGAVPGPRVVGDFNQRIRGNQAFSGDLSSGR 134

Query: 373 XXXXEFGSWAVRDS 414
               + G+W   DS
Sbjct: 135 GRGRDSGTWNQFDS 148


>ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Cucumis sativus]
          Length = 901

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/134 (51%), Positives = 87/134 (64%)
 Frame = +1

Query: 13  DSASDPEEKEFSXXXXXXRNHKHRRRETQTHSLERDPVQVSTRPYRNRNKPFENGHPHRE 192
           D  SDPEEK+ S      RNHKHRRRET++ SLERD  +   RPY  R+KPFENG   R+
Sbjct: 15  DYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDAREHVLRPYGKRSKPFENGRSFRD 74

Query: 193 AASQSNETWRNYNMPPLDKDFPGKFDRRRPGSTPVSRSPLDLNQRGRGNQSWTGDPGSXX 372
             SQ+NE W+++N P L+KD PGKFD+RR G+ P  R   D NQR RGNQ+++GD  S  
Sbjct: 75  NDSQANEAWKSFNAPTLEKDTPGKFDKRRLGAVPGPRVVGDFNQRIRGNQAFSGDLSSGR 134

Query: 373 XXXXEFGSWAVRDS 414
               + G+W   DS
Sbjct: 135 GRGRDSGTWNQFDS 148