BLASTX nr result

ID: Cnidium21_contig00042974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042974
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   143   1e-32
emb|CBI32139.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   132   3e-29
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   127   1e-27
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   120   9e-26

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/120 (54%), Positives = 84/120 (70%)
 Frame = +3

Query: 3    DSEYHTYCLNPPLVRIPEGNWYCPSCLAGKRIAQVSSYGMQISGMCRRKRYQKDLTDKYL 182
            DSEYHTYCLNPPL RIPEGNWYCPSC+A +R++Q +S   ++   CRRKRYQ + T  YL
Sbjct: 1062 DSEYHTYCLNPPLARIPEGNWYCPSCVAAQRLSQGTSRSAEVFSRCRRKRYQGEFTRTYL 1121

Query: 183  DELADLANTMXXXXXXXXXXXXRIFLIKLLSDEILNSAVIRDHLDRSVSVSTDLQQKLRS 362
            + L  LA  M            R+FL+K   +E+LNSA+IR+HL++  S+S DLQQKLR+
Sbjct: 1122 ETLTHLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQCASLSADLQQKLRT 1181


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/120 (54%), Positives = 84/120 (70%)
 Frame = +3

Query: 3    DSEYHTYCLNPPLVRIPEGNWYCPSCLAGKRIAQVSSYGMQISGMCRRKRYQKDLTDKYL 182
            DSEYHTYCLNPPL RIPEGNWYCPSC+A +R++Q +S   ++   CRRKRYQ + T  YL
Sbjct: 959  DSEYHTYCLNPPLARIPEGNWYCPSCVAAQRLSQGTSRSAEVFSRCRRKRYQGEFTRTYL 1018

Query: 183  DELADLANTMXXXXXXXXXXXXRIFLIKLLSDEILNSAVIRDHLDRSVSVSTDLQQKLRS 362
            + L  LA  M            R+FL+K   +E+LNSA+IR+HL++  S+S DLQQKLR+
Sbjct: 1019 ETLTHLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQCASLSADLQQKLRT 1078


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/153 (49%), Positives = 89/153 (58%)
 Frame = +3

Query: 3    DSEYHTYCLNPPLVRIPEGNWYCPSCLAGKRIAQVSSYGMQISGMCRRKRYQKDLTDKYL 182
            DS YHTYCLNPPL RIPEGNWYCPSC     I Q +S   Q    CR+KR Q + T   L
Sbjct: 938  DSGYHTYCLNPPLARIPEGNWYCPSC-----ITQGASQVPQFVSHCRKKRRQGEFTHGVL 992

Query: 183  DELADLANTMXXXXXXXXXXXXRIFLIKLLSDEILNSAVIRDHLDRSVSVSTDLQQKLRS 362
            + LA L  TM            RIFL+K L DE+LNSA IR+HLD+  SVS DLQQKLRS
Sbjct: 993  EALAHLGTTMEITDYWDYSVEERIFLLKFLGDEVLNSANIREHLDQCASVSADLQQKLRS 1052

Query: 363  TTSDLNSRVEKAQTYMNLQEQASGSTATGYMLP 461
             + +  +   K +  +N     SG   T  +LP
Sbjct: 1053 LSMEWRNLKFKEELMLN-GVGKSGKEGTTTVLP 1084


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/149 (42%), Positives = 95/149 (63%)
 Frame = +3

Query: 3    DSEYHTYCLNPPLVRIPEGNWYCPSCLAGKRIAQVSSYGMQISGMCRRKRYQKDLTDKYL 182
            D+EYHTYCLNPPL RIPEGNWYCPSC++  R+ Q +S   Q+ G    K+YQ ++T  YL
Sbjct: 1242 DAEYHTYCLNPPLARIPEGNWYCPSCVS-VRMVQEASVSTQVIGQNSCKKYQGEMTRIYL 1300

Query: 183  DELADLANTMXXXXXXXXXXXXRIFLIKLLSDEILNSAVIRDHLDRSVSVSTDLQQKLRS 362
            + L  LA+ M            R FL+K L DE+LNSA++R HL++ +  + ++QQKLR+
Sbjct: 1301 ETLVHLASAMEEKDYWDFGVDERTFLLKFLCDELLNSALVRQHLEQCMESTAEVQQKLRT 1360

Query: 363  TTSDLNSRVEKAQTYMNLQEQASGSTATG 449
              ++  + ++  + +M L+    G+ A+G
Sbjct: 1361 LYAEWKN-LKSKEEFMALKSAKMGTGASG 1388


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/120 (50%), Positives = 74/120 (61%)
 Frame = +3

Query: 3    DSEYHTYCLNPPLVRIPEGNWYCPSCLAGKRIAQVSSYGMQISGMCRRKRYQKDLTDKYL 182
            D+EYHTYCLNPPL RIPEGNWYCPSC+AG  +  VS +   +    + K  Q D T  YL
Sbjct: 1240 DAEYHTYCLNPPLARIPEGNWYCPSCVAGISMVDVSEH-THVIAQRQGKNCQGDFTHAYL 1298

Query: 183  DELADLANTMXXXXXXXXXXXXRIFLIKLLSDEILNSAVIRDHLDRSVSVSTDLQQKLRS 362
            + LA LA  M            R FL K L DE+LN+A+IR HL++    S +LQQKLRS
Sbjct: 1299 ESLAHLAAAMEEKEYWELSVDQRTFLFKFLCDELLNTALIRQHLEQCAESSAELQQKLRS 1358


Top