BLASTX nr result

ID: Cnidium21_contig00042954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042954
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...   154   7e-36
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...   153   2e-35
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...   149   2e-34
ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227...   147   1e-33
ref|XP_004139661.1| PREDICTED: histone H3-like centromeric prote...   147   1e-33

>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/90 (78%), Positives = 84/90 (93%)
 Frame = -1

Query: 296 REIRKFQKSWNLLIPAAPFIRTVREISFYLAPSITRWQAEALRALQEASEDFIIHLFEDA 117
           REIR+FQK+ +LLIPAAPFIRTVREIS++ AP I+RW AEAL ALQEA+ED+++HLFEDA
Sbjct: 67  REIRRFQKTTHLLIPAAPFIRTVREISYFFAPEISRWTAEALVALQEAAEDYLVHLFEDA 126

Query: 116 MLCAIHAKRVTVMRKDWELARRLGKKGQPW 27
           MLCAIHAKRVT+M+KDWELARR+G KGQPW
Sbjct: 127 MLCAIHAKRVTLMKKDWELARRIGGKGQPW 156


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/90 (76%), Positives = 84/90 (93%)
 Frame = -1

Query: 296 REIRKFQKSWNLLIPAAPFIRTVREISFYLAPSITRWQAEALRALQEASEDFIIHLFEDA 117
           REIR+FQK+WNLLIPAAPFIR V+EIS++ AP +TRWQAEAL ALQEA+EDF++HLF+D+
Sbjct: 68  REIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALIALQEAAEDFLVHLFDDS 127

Query: 116 MLCAIHAKRVTVMRKDWELARRLGKKGQPW 27
           MLCAIHAKRVT+M+KD+ELARRLG K +PW
Sbjct: 128 MLCAIHAKRVTLMKKDFELARRLGGKARPW 157


>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/90 (75%), Positives = 83/90 (92%)
 Frame = -1

Query: 296 REIRKFQKSWNLLIPAAPFIRTVREISFYLAPSITRWQAEALRALQEASEDFIIHLFEDA 117
           REIR+FQK+W+LLIPAAPFIR V+EIS + AP +TRWQAEAL ALQEA+EDF++HLF+D+
Sbjct: 67  REIRRFQKTWDLLIPAAPFIRLVKEISHFFAPEVTRWQAEALIALQEAAEDFLVHLFDDS 126

Query: 116 MLCAIHAKRVTVMRKDWELARRLGKKGQPW 27
           MLCAIHAKRVT+M+KD+ELARRLG K +PW
Sbjct: 127 MLCAIHAKRVTLMKKDFELARRLGGKARPW 156


>ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227719 [Cucumis sativus]
          Length = 323

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = -1

Query: 296 REIRKFQKSWNLLIPAAPFIRTVREISFYLAPSITRWQAEALRALQEASEDFIIHLFEDA 117
           +EIR  QKSWNLLIPA+ FIR V+E+S  LAP ITRWQAEAL ALQEA+EDF++HLFED 
Sbjct: 234 KEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHLFEDT 293

Query: 116 MLCAIHAKRVTVMRKDWELARRLGKKGQPW 27
           MLCAIHAKRVT+M+KD+ELARRLG KG+PW
Sbjct: 294 MLCAIHAKRVTIMKKDFELARRLGGKGRPW 323


>ref|XP_004139661.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Cucumis
           sativus]
          Length = 154

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = -1

Query: 296 REIRKFQKSWNLLIPAAPFIRTVREISFYLAPSITRWQAEALRALQEASEDFIIHLFEDA 117
           +EIR  QKSWNLLIPA+ FIR V+E+S  LAP ITRWQAEAL ALQEA+EDF++HLFED 
Sbjct: 65  KEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHLFEDT 124

Query: 116 MLCAIHAKRVTVMRKDWELARRLGKKGQPW 27
           MLCAIHAKRVT+M+KD+ELARRLG KG+PW
Sbjct: 125 MLCAIHAKRVTIMKKDFELARRLGGKGRPW 154


Top