BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042953
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   346   5e-93
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   337   3e-90
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   322   1e-85
ref|NP_196887.1| FtsJ-like methyltransferase family protein [Ara...   321   2e-85

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
            vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
            product [Vitis vinifera]
          Length = 233

 Score =  346 bits (888), Expect = 5e-93
 Identities = 174/232 (75%), Positives = 193/232 (83%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1043 MSGGGAPDFFYREAHRLGYVARSAFKLLQMQKQYKLITPGSSVLDLGCAPGAWLQVACQS 864
            MSG G PDFFYREA RLGY ARSAFKLLQMQKQYKLI PGSSVLDLGCAPGAWLQVACQS
Sbjct: 1    MSGAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 863  LGPLKNGGSVVGIDIKKVKVPTL-CDSRVQTISADVMNLPKDQIRKLSPLQKGFSVILSD 687
            LGPLKNGG VVGID+KKVKVP++ CDSRV+T+ ADVM LPKD+IR  SP +KGFSVILSD
Sbjct: 61   LGPLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSD 120

Query: 686  MCPLVSGISTRDAALSAELGMRXXXXXXXXXXXAPPRDTTEGEIQSDSSSCSPEDDGVLK 507
            MCPLVSGI+T+DA LSAELGM+           AP  D  +     D S+  P+DDG+L+
Sbjct: 121  MCPLVSGITTKDAVLSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQ 180

Query: 506  PGGHLIIKLLESEDNKEFSQICKPLFRKSSWLRPKATRPSSREIYLICQGLR 351
            PGGHL+IKLLESED + FS+ICKPLFRK+SWLRPKATR SSREIYLICQGLR
Sbjct: 181  PGGHLVIKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
            predicted protein [Populus trichocarpa]
          Length = 232

 Score =  345 bits (885), Expect = 1e-92
 Identities = 175/231 (75%), Positives = 197/231 (85%), Gaps = 1/231 (0%)
 Frame = -2

Query: 1043 MSGGGAPDFFYREAHRLGYVARSAFKLLQMQKQYKLITPGSSVLDLGCAPGAWLQVACQS 864
            MSG G PDFFYREA RLGYVARSAFKLLQ+QK++KLI PGSSVLDLGCAPGAWLQVACQS
Sbjct: 1    MSGAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQS 60

Query: 863  LGPLKNGGSVVGIDIKKVKVPTL-CDSRVQTISADVMNLPKDQIRKLSPLQKGFSVILSD 687
            LGPLKNGG+VVGID+KKVKVP L CDSRVQT+ ADVM LPK+Q+R LSP QKGFSV+LSD
Sbjct: 61   LGPLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSD 120

Query: 686  MCPLVSGISTRDAALSAELGMRXXXXXXXXXXXAPPRDTTEGEIQSDSSSCSPEDDGVLK 507
            MCPLVSGI+TRDAALSAELGM+           A   +     + +D S C+ +D+G+L+
Sbjct: 121  MCPLVSGITTRDAALSAELGMQALGLAVGRAATAHLDEIRTDRLLND-SVCTADDNGILQ 179

Query: 506  PGGHLIIKLLESEDNKEFSQICKPLFRKSSWLRPKATRPSSREIYLICQGL 354
            PGGHL+IKLLESEDNKEFS+ICKPLFRK+SWLRPKATR SSREIYLICQGL
Sbjct: 180  PGGHLVIKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
            putative [Ricinus communis]
          Length = 228

 Score =  337 bits (864), Expect = 3e-90
 Identities = 173/232 (74%), Positives = 195/232 (84%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1043 MSGGGAPDFFYREAHRLGYVARSAFKLLQMQKQYKLITPGSSVLDLGCAPGAWLQVACQS 864
            MSG GAPDFFYREA RLGYVARSAFKLLQ+QKQ+KLITPGSSVLDLGCAPGAWLQVACQS
Sbjct: 1    MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQS 60

Query: 863  LGPLKNGGSVVGIDIKKVKVPT-LCDSRVQTISADVMNLPKDQIRKLSPLQKGFSVILSD 687
            LGPLKNGGSVVGID+KKVKVP   CD+RV+T+ ADVMNLP+DQ+R LS  QKGFSV+LSD
Sbjct: 61   LGPLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSD 120

Query: 686  MCPLVSGISTRDAALSAELGMRXXXXXXXXXXXAPPRDTTEGEIQSDSSSCSPEDDGVLK 507
            MCP VSGI+T+DAALS ELGM+           A P D    E Q+D S+    D+GVL+
Sbjct: 121  MCPPVSGITTKDAALSMELGMQALDIAIGGAASAHPDD----ENQNDDSTSGENDNGVLQ 176

Query: 506  PGGHLIIKLLESEDNKEFSQICKPLFRKSSWLRPKATRPSSREIYLICQGLR 351
             GGHL+IKLLESED +EF++ICKPLFRK+SWLRPKATR SSREIYLICQGL+
Sbjct: 177  AGGHLVIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
            [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
            PREDICTED: ribosomal RNA large subunit methyltransferase
            E-like [Cucumis sativus]
          Length = 238

 Score =  322 bits (825), Expect = 1e-85
 Identities = 167/233 (71%), Positives = 191/233 (81%), Gaps = 3/233 (1%)
 Frame = -2

Query: 1043 MSGGGAPDFFYREAHRLGYVARSAFKLLQMQKQYKLITPGSSVLDLGCAPGAWLQVACQS 864
            MSG GAPDFFYREA RLGYVARSAFKLLQ+Q Q+KLIT GSSVLDLGCAPGAWLQVACQS
Sbjct: 1    MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 863  LGPLKNGGSVVGIDIKKVKVPTL-CDSRVQTISADVMNLPKDQIRKLSPLQKGFSVILSD 687
            LGP +NGGSV+GIDIKKVKVP + CDSRVQT+SADVMNLPK +++ LSP +KGFSVILSD
Sbjct: 61   LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 686  MCPLVSGISTRDAALSAELGMRXXXXXXXXXXXAPPRDTTEGEIQS--DSSSCSPEDDGV 513
            MCPLVSGI+TRDAALS ELGM+               D   G+ +   D S+ + + DGV
Sbjct: 121  MCPLVSGITTRDAALSVELGMQAVNLALGEAALG-VGDVIHGKDKDSVDDSTSASDCDGV 179

Query: 512  LKPGGHLIIKLLESEDNKEFSQICKPLFRKSSWLRPKATRPSSREIYLICQGL 354
            L+ GGHL++KLLESED +EFS++ KPLFRK+SWLRPKATR SSREIYLICQ L
Sbjct: 180  LRQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|NP_196887.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
            gi|5821280|dbj|BAA83750.1| FtsJ [Arabidopsis thaliana]
            gi|10177649|dbj|BAB11111.1| FtsJ [Arabidopsis thaliana]
            gi|332004564|gb|AED91947.1| FtsJ-like methyltransferase
            family protein [Arabidopsis thaliana]
          Length = 224

 Score =  321 bits (823), Expect = 2e-85
 Identities = 169/240 (70%), Positives = 189/240 (78%), Gaps = 9/240 (3%)
 Frame = -2

Query: 1043 MSGGGAPDFFYREAHRLGYVARSAFKLLQMQKQYKLITPGSSVLDLGCAPGAWLQVACQS 864
            MSG G PDFFYREA RLGYVARSAFKLLQ+QKQYKLI PGSSVLDLGCAPGAWLQVACQS
Sbjct: 1    MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 863  LGPLKNGGSVVGIDIKKVKVPTLCDSRVQTISADVMNLPKDQIRKLSPLQKGFSVILSDM 684
            LGPL++GG VVG+DIKKVKVP  CDSRVQTI+ADV+N P+ +IR+LSP Q GFSVILSDM
Sbjct: 61   LGPLRSGGIVVGMDIKKVKVPPQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSDM 120

Query: 683  CPLVSGISTRDAALSAELGMRXXXXXXXXXXXAPPRDTTEGEIQSDSSSCSPEDD----- 519
            C  VSGI+TRDAALSAELGMR               D   G+    + S SP DD     
Sbjct: 121  CHSVSGITTRDAALSAELGMRAL-------------DLAVGQA---AISQSPNDDDGGPN 164

Query: 518  ----GVLKPGGHLIIKLLESEDNKEFSQICKPLFRKSSWLRPKATRPSSREIYLICQGLR 351
                GVL+ GGHL+IKLLESED ++F++ICKP+F K+SWLRPKATRPSSREIYLICQG R
Sbjct: 165  ESRPGVLRHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224