BLASTX nr result

ID: Cnidium21_contig00042901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042901
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]   115   3e-24
ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus c...   107   1e-21
gb|ACU21406.1| unknown [Glycine max]                                   97   2e-18
ref|NP_199981.2| hydroxyproline-rich glycoprotein family protein...    84   2e-14

>emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]
          Length = 341

 Score =  115 bits (289), Expect = 3e-24
 Identities = 71/173 (41%), Positives = 94/173 (54%), Gaps = 30/173 (17%)
 Frame = -2

Query: 462 SNRHRIKQPVSVPFLWEVRPGLPKKDWKPNTSITQ------------------------A 355
           SNR +I+QP SVPFLWE +PG+PKKDWKP  +                            
Sbjct: 8   SNRKQIRQPPSVPFLWEEKPGIPKKDWKPEVTAVNPPPPPPPPPPPPPPPPPPPPPPPPP 67

Query: 354 DPFALPPVKLIASVPFKWEEMPGKPLPYF---PQAMPKAVXXXXXXXXPSMLGDSRSPAP 184
            P   PP+KLIAS+PF WEE PGKPLP+F   P      +         S L D+     
Sbjct: 68  PPPPPPPIKLIASIPFTWEEKPGKPLPFFSGTPHDDSLLLFPPKKLVCCSSLSDAD---- 123

Query: 183 TVYSQNYCDNSDDE---MYDSYLDAWGFEFDEESISSAPSLLANRMLPMLAIT 34
              S++Y D+ DDE   +++S  +A+GFE D +S SSAPSLLANR++  +AI+
Sbjct: 124 ---SKDYEDDGDDEHDGIFESDFEAFGFETD-DSFSSAPSLLANRLMSTVAIS 172


>ref|XP_002321853.1| predicted protein [Populus trichocarpa] gi|222868849|gb|EEF05980.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  113 bits (283), Expect = 1e-23
 Identities = 70/159 (44%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
 Frame = -2

Query: 462 SNRHRIKQPVSVPFLWEVRPGLPKKDWKPNTSITQADPFALPPVKLIASVPFKWEEMPGK 283
           S +  I+QP SVPFLWEVRPG+ K+DWKP  S     P  LPPVKLIASVPF WEE PGK
Sbjct: 29  SRKKHIRQPPSVPFLWEVRPGVAKRDWKPEVS--SVTPVQLPPVKLIASVPFNWEEKPGK 86

Query: 282 PLPYFPQA------MPKAVXXXXXXXXPSMLGDSRSPAPTVYSQNYCDNSDDEMYDSYLD 121
           PL  F Q+       P+A             GD         S       +  M++S L+
Sbjct: 87  PLSCFSQSPESAFITPQANLLALPWHVTCSQGDDNHKQEDGDSGEENFGDEQVMFNSDLE 146

Query: 120 AWGFEFDEESISSAPSLLANRMLPMLAITNGDSGQLQAP 4
           ++ FE D ES SSA SLLAN M+  +AI+     Q  +P
Sbjct: 147 SFSFETD-ESFSSAQSLLANCMVSSVAISTAVPVQTTSP 184


>ref|XP_002510900.1| hypothetical protein RCOM_1498790 [Ricinus communis]
           gi|223550015|gb|EEF51502.1| hypothetical protein
           RCOM_1498790 [Ricinus communis]
          Length = 278

 Score =  107 bits (266), Expect = 1e-21
 Identities = 72/166 (43%), Positives = 91/166 (54%), Gaps = 20/166 (12%)
 Frame = -2

Query: 468 QGSNRHRIKQPVSVPFLWEVRPGLPKKDWKPNTS--ITQADPFALPPVKLIASVPFKWEE 295
           + S R  I+QP  VPFLWE RPG+ KKDWKP  S   T A P   PPVKLIASVPF WEE
Sbjct: 8   EASKRKHIRQPPFVPFLWEERPGIAKKDWKPVVSSVTTLALP---PPVKLIASVPFNWEE 64

Query: 294 MPGKPLPYF---PQAMPKAVXXXXXXXXPSMLGDSRSPAPTVYSQNYCD-----NSDDEM 139
            PGKPLP F   P   P A               +  P+P +Y Q  CD     N +   
Sbjct: 65  KPGKPLPCFSQPPMESPPATL-------------NSLPSPPMYYQR-CDDCEFNNENRAG 110

Query: 138 YDSY---------LDAWGFEFD-EESISSAPSLLANRMLPMLAITN 31
           +D+Y         LD   F F+ ++S+SSAPSLLAN ++  +A+++
Sbjct: 111 HDNYGEKEEGIFDLDIESFSFETDDSLSSAPSLLANCLVSSVAVSD 156


>gb|ACU21406.1| unknown [Glycine max]
          Length = 222

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/152 (38%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
 Frame = -2

Query: 465 GSNRHRIKQPVSVPFLWEVRPGLPKKDWKPNTSITQADPFALPPVKLIASVPFKWEEMPG 286
           G  +H +++P SVPF+WEV+PG+PKKDWKP             P+KLIASVPF WEE PG
Sbjct: 5   GKKKH-VREPPSVPFIWEVKPGIPKKDWKPEPE----PEVPKTPLKLIASVPFVWEEKPG 59

Query: 285 KPLPYF-------PQAMPKAVXXXXXXXXPSMLGDSRSPAPTVYSQNYCDNSDDEMYDSY 127
           KPLP F       P+ +   V            G           +    +SD+E   + 
Sbjct: 60  KPLPNFSVDHPVPPKPLLIHVASSSAFSFACNFGHDHDK-----DKGSLSSSDNESITTL 114

Query: 126 -LDAWGFEFDEESISSAPSLLANRMLPMLAIT 34
            L+A+ F+ DE  +SS PSLLAN ++P   ++
Sbjct: 115 DLEAFSFDEDESFVSSVPSLLANCLVPSAKVS 146


>ref|NP_199981.2| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|332008731|gb|AED96114.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
 Frame = -2

Query: 456 RHRIKQPVSVPFLWEVRPGLPKKDWKPNTSITQADPFALP-----PVKLIASVPFKWEEM 292
           R +++QP SVPF+WE RPG PKK+W+P+ +     P  LP     PVKL+ SVPF+WEE 
Sbjct: 13  RKQLRQPPSVPFIWEERPGFPKKNWQPSLATFVPSPPPLPPPIPVPVKLVTSVPFRWEET 72

Query: 291 PGKPLP 274
           PGKPLP
Sbjct: 73  PGKPLP 78


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