BLASTX nr result
ID: Cnidium21_contig00042877
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042877 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEV42261.1| hypothetical protein [Beta vulgaris] 67 2e-09 gb|ACY01928.1| hypothetical protein [Beta vulgaris] 65 7e-09 ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232... 57 1e-06 gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 57 1e-06 ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211... 56 3e-06 >gb|AEV42261.1| hypothetical protein [Beta vulgaris] Length = 1396 Score = 66.6 bits (161), Expect = 2e-09 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%) Frame = +3 Query: 3 SYSPQSGTSTYSS--FKSQSNSYNPATRPMXXXXXXXXXXXXX-YRSHTNXXXXXXXXXX 173 +YSP + T+ SS F++Q+ +Y P P ++ T+ Sbjct: 232 NYSPNTHTTPNSSQTFRTQTQTYLPPKHPAPPQSVFSSPSIVSPAKTKTHIPIARPYGEI 291 Query: 174 XXLSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVI 287 LS+K+ Q KRERG CFRCD+KWS GHRC KKELSV+ Sbjct: 292 RRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSVL 328 >gb|ACY01928.1| hypothetical protein [Beta vulgaris] Length = 1583 Score = 64.7 bits (156), Expect = 7e-09 Identities = 30/68 (44%), Positives = 39/68 (57%) Frame = +3 Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVIXXXXXXXXXXXXXXXDVEDEAVDC 359 LS+K+ Q KRE G CFRCDEKW+ GHRCKKKELS++ +++ D Sbjct: 337 LSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDD 396 Query: 360 DGRDGHSP 383 + HSP Sbjct: 397 SQLEIHSP 404 >ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus] Length = 446 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/64 (43%), Positives = 39/64 (60%) Frame = +3 Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVIXXXXXXXXXXXXXXXDVEDEAVDC 359 LSD +FQAKRE+G CF+CDEK+ +GH+CK KE+ + DVE+E ++ Sbjct: 276 LSDAEFQAKREKGLCFKCDEKYYSGHKCKAKEIREL-------RMFVVRADDVEEEIIEE 328 Query: 360 DGRD 371 D D Sbjct: 329 DEYD 332 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 57.4 bits (137), Expect = 1e-06 Identities = 21/36 (58%), Positives = 30/36 (83%) Frame = +3 Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVI 287 L++K+ Q KR +G CF+CDEKW GH+C++KELSV+ Sbjct: 403 LTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVL 438 >ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis sativus] Length = 674 Score = 55.8 bits (133), Expect = 3e-06 Identities = 22/33 (66%), Positives = 29/33 (87%) Frame = +3 Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKEL 278 LSD +FQAKRE+G CF+CDEK+ +GH+CK KE+ Sbjct: 71 LSDVEFQAKREKGLCFKCDEKYYSGHKCKAKEI 103