BLASTX nr result

ID: Cnidium21_contig00042877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042877
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    67   2e-09
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    65   7e-09
ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232...    57   1e-06
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    57   1e-06
ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211...    56   3e-06

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = +3

Query: 3   SYSPQSGTSTYSS--FKSQSNSYNPATRPMXXXXXXXXXXXXX-YRSHTNXXXXXXXXXX 173
           +YSP + T+  SS  F++Q+ +Y P   P                ++ T+          
Sbjct: 232 NYSPNTHTTPNSSQTFRTQTQTYLPPKHPAPPQSVFSSPSIVSPAKTKTHIPIARPYGEI 291

Query: 174 XXLSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVI 287
             LS+K+ Q KRERG CFRCD+KWS GHRC KKELSV+
Sbjct: 292 RRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSVL 328


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/68 (44%), Positives = 39/68 (57%)
 Frame = +3

Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVIXXXXXXXXXXXXXXXDVEDEAVDC 359
           LS+K+ Q KRE G CFRCDEKW+ GHRCKKKELS++               +++    D 
Sbjct: 337 LSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDD 396

Query: 360 DGRDGHSP 383
              + HSP
Sbjct: 397 SQLEIHSP 404


>ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
          Length = 446

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = +3

Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVIXXXXXXXXXXXXXXXDVEDEAVDC 359
           LSD +FQAKRE+G CF+CDEK+ +GH+CK KE+  +               DVE+E ++ 
Sbjct: 276 LSDAEFQAKREKGLCFKCDEKYYSGHKCKAKEIREL-------RMFVVRADDVEEEIIEE 328

Query: 360 DGRD 371
           D  D
Sbjct: 329 DEYD 332


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = +3

Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKELSVI 287
           L++K+ Q KR +G CF+CDEKW  GH+C++KELSV+
Sbjct: 403 LTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVL 438


>ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
           sativus]
          Length = 674

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +3

Query: 180 LSDKDFQAKRERGECFRCDEKWSAGHRCKKKEL 278
           LSD +FQAKRE+G CF+CDEK+ +GH+CK KE+
Sbjct: 71  LSDVEFQAKREKGLCFKCDEKYYSGHKCKAKEI 103


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