BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042875
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   141   5e-32
emb|CAB78071.1| putative protein [Arabidopsis thaliana]               140   1e-31
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   134   8e-30
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   134   8e-30
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   129   2e-28

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  141 bits (356), Expect = 5e-32
 Identities = 58/155 (37%), Positives = 105/155 (67%)
 Frame = -2

Query: 472 YKSWERCNDLVISWILFNLDENIARSVLFLKTARSIWQDLESRFGYTSVTQVFSLEHKLA 293
           ++ W RC+D+V++W+L +L + IA SVL+ +TA+ +WQ+LE R+G    T++F L+ +L 
Sbjct: 93  FEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQRELN 152

Query: 292 DMKQGHQSVSEFYTQIRTVWDSMDDADSMPTCSCDKCTCQLYGRDKQMQQNHRVLQFLMK 113
           ++ QG   V+ ++ +++ +WD M   ++   CSC+ C C+  G + +MQ++ +++QFLM 
Sbjct: 153 NVSQGTNDVAAYFNKLKRIWDQMKVLNTFMVCSCE-CNCEAKGHNAKMQEDQQLIQFLMG 211

Query: 112 LNDNFSMVRANILMMIPLPDLTHVYRMVAQEESHK 8
           LN+ +S +R NILMM PLP     Y +++ EE+ +
Sbjct: 212 LNEVYSGIRGNILMMKPLPSTAQAYSIISHEETQR 246


>emb|CAB78071.1| putative protein [Arabidopsis thaliana]
          Length = 290

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/159 (38%), Positives = 100/159 (62%)
 Frame = -2

Query: 484 TSPDYKSWERCNDLVISWILFNLDENIARSVLFLKTARSIWQDLESRFGYTSVTQVFSLE 305
           T  D  SW RCND+V +W++ ++ + I +S+LF+ TA SIW++L SRF      +VF +E
Sbjct: 68  THRDAGSWSRCNDMVATWLMNSVSKKIGQSLLFMSTAESIWKNLLSRFKQDDAPRVFEIE 127

Query: 304 HKLADMKQGHQSVSEFYTQIRTVWDSMDDADSMPTCSCDKCTCQLYGRDKQMQQNHRVLQ 125
            +L  ++QG   VS +YT++ T+W+   +   +P C+C +C C      ++MQQ  RV +
Sbjct: 128 QRLGSLQQGSMDVSTYYTELVTLWEEYKNYIELPLCTCGRCECNASALWEKMQQRSRVTK 187

Query: 124 FLMKLNDNFSMVRANILMMIPLPDLTHVYRMVAQEESHK 8
           FLM LN+ +   + +ILM+ P+P +  V+ MVAQ+E  K
Sbjct: 188 FLMGLNEAYEATQRHILMLKPIPTIEDVFNMVAQDERQK 226


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/156 (37%), Positives = 98/156 (62%)
 Frame = -2

Query: 484 TSPDYKSWERCNDLVISWILFNLDENIARSVLFLKTARSIWQDLESRFGYTSVTQVFSLE 305
           T   + SW+RCND+VISW+L ++  +IA SV++ +T   IW DL  RF   + ++++ ++
Sbjct: 70  TDDSFPSWQRCNDMVISWLLNSIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIK 129

Query: 304 HKLADMKQGHQSVSEFYTQIRTVWDSMDDADSMPTCSCDKCTCQLYGRDKQMQQNHRVLQ 125
             + + +QG QS+S +YT+++  WD +     + +CSC         + K+M +  RV+Q
Sbjct: 130 RDIVEHRQGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLE-----KLKEMDEKERVMQ 184

Query: 124 FLMKLNDNFSMVRANILMMIPLPDLTHVYRMVAQEE 17
           FLM LND+++ +R  IL+M PLPD   VY +V Q+E
Sbjct: 185 FLMGLNDSYAAIRGQILLMQPLPDTRRVYSLVLQQE 220


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  134 bits (337), Expect = 8e-30
 Identities = 54/157 (34%), Positives = 98/157 (62%)
 Frame = -2

Query: 475 DYKSWERCNDLVISWILFNLDENIARSVLFLKTARSIWQDLESRFGYTSVTQVFSLEHKL 296
           D+ +W RCND+V +W++ ++D+ I +S+L++ T + IW +L SRF      ++F +E KL
Sbjct: 90  DFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKL 149

Query: 295 ADMKQGHQSVSEFYTQIRTVWDSMDDADSMPTCSCDKCTCQLYGRDKQMQQNHRVLQFLM 116
           + ++QG   +S +YT + T+W+   +   +P C+C +C C    + + +QQ  RV +FL 
Sbjct: 150 SKIEQGSMDISTYYTALLTLWEEHRNYVELPVCTCGRCECDAAVKWEHLQQRSRVTKFLK 209

Query: 115 KLNDNFSMVRANILMMIPLPDLTHVYRMVAQEESHKD 5
           +LN+ F   R +ILM+ P+P +   + MV Q+E  ++
Sbjct: 210 ELNEGFDQTRRHILMLKPIPTIKEAFNMVTQDERQRN 246


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  129 bits (325), Expect = 2e-28
 Identities = 52/156 (33%), Positives = 98/156 (62%)
 Frame = -2

Query: 475 DYKSWERCNDLVISWILFNLDENIARSVLFLKTARSIWQDLESRFGYTSVTQVFSLEHKL 296
           DY +W RCND V +W++ ++ + I +S+LF+ TA  IW+++ SRF      +V+ +E +L
Sbjct: 91  DYGAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRL 150

Query: 295 ADMKQGHQSVSEFYTQIRTVWDSMDDADSMPTCSCDKCTCQLYGRDKQMQQNHRVLQFLM 116
           + ++QG   +S +YT+++T+W+   +   +P C+C +C C    + +++QQ   V +FLM
Sbjct: 151 SKIEQGSMDISAYYTELQTLWEEHKNYVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLM 210

Query: 115 KLNDNFSMVRANILMMIPLPDLTHVYRMVAQEESHK 8
            LN+++   R +ILM+ P+  +   + +V Q+E  K
Sbjct: 211 GLNESYEQTRRHILMLKPIRTIEEAFNIVTQDERQK 246