BLASTX nr result
ID: Cnidium21_contig00042871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00042871
(821 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsil... 110 4e-22
ref|XP_004142957.1| PREDICTED: LOW QUALITY PROTEIN: T-complex pr... 110 4e-22
prf||2206327A T complex protein 110 4e-22
gb|AAD11431.1| T-complex protein 1 epsilon subunit, partial [Mes... 105 1e-20
emb|CBI16835.3| unnamed protein product [Vitis vinifera] 105 1e-20
>ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Cucumis
sativus]
Length = 535
Score = 110 bits (275), Expect = 4e-22
Identities = 65/115 (56%), Positives = 76/115 (66%)
Frame = +3
Query: 174 NALCVSRNLIRKIFIVYGGVSAEIS*LLYIETAVDKYP*VK*YAIRAFADTLDSVSMAFA 353
+ALCV+RNLIR IVYGG SAEIS + +ETA DKYP V+ YAIRAFAD LD+V MA A
Sbjct: 400 DALCVARNLIRNNSIVYGGGSAEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALA 459
Query: 354 LMLWTLSSWRLQKIEVSMPLKHYLR*YHSKENYPWCGVDYNDVGTIDMHEQNVFE 518
+ LQ IE +K KEN P+CG+D ND+GT DM EQNVFE
Sbjct: 460 ------ENSGLQPIETLSAVKS----QQIKENNPYCGIDCNDIGTNDMREQNVFE 504
Score = 64.7 bits (156), Expect = 2e-08
Identities = 46/93 (49%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Frame = +2
Query: 353 ADALDSVLMALAENRGLHAIETLSAVISQQGELSLVWCRL**CWHD*HA*AEC----L*D 520
ADALD+V MALAEN GL IETLSAV SQQ + + +C + +C D
Sbjct: 448 ADALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGI-----------DCNDIGTND 496
Query: 521 I*DSNSS----GKQQQLLFATQVVSMILKIDDI 607
+ + N GKQQQ+L ATQVV MILKIDD+
Sbjct: 497 MREQNVFETLIGKQQQILLATQVVKMILKIDDV 529
>ref|XP_004142957.1| PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit
epsilon-like [Cucumis sativus]
Length = 528
Score = 110 bits (275), Expect = 4e-22
Identities = 65/115 (56%), Positives = 76/115 (66%)
Frame = +3
Query: 174 NALCVSRNLIRKIFIVYGGVSAEIS*LLYIETAVDKYP*VK*YAIRAFADTLDSVSMAFA 353
+ALCV+RNLIR IVYGG SAEIS + +ETA DKYP V+ YAIRAFAD LD+V MA A
Sbjct: 393 DALCVARNLIRNNSIVYGGGSAEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALA 452
Query: 354 LMLWTLSSWRLQKIEVSMPLKHYLR*YHSKENYPWCGVDYNDVGTIDMHEQNVFE 518
+ LQ IE +K KEN P+CG+D ND+GT DM EQNVFE
Sbjct: 453 ------ENSGLQPIETLSAVKS----QQIKENNPYCGIDCNDIGTNDMREQNVFE 497
Score = 64.7 bits (156), Expect = 2e-08
Identities = 46/93 (49%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Frame = +2
Query: 353 ADALDSVLMALAENRGLHAIETLSAVISQQGELSLVWCRL**CWHD*HA*AEC----L*D 520
ADALD+V MALAEN GL IETLSAV SQQ + + +C + +C D
Sbjct: 441 ADALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGI-----------DCNDIGTND 489
Query: 521 I*DSNSS----GKQQQLLFATQVVSMILKIDDI 607
+ + N GKQQQ+L ATQVV MILKIDD+
Sbjct: 490 MREQNVFETLIGKQQQILLATQVVKMILKIDDV 522
>prf||2206327A T complex protein
Length = 534
Score = 110 bits (275), Expect = 4e-22
Identities = 65/115 (56%), Positives = 76/115 (66%)
Frame = +3
Query: 174 NALCVSRNLIRKIFIVYGGVSAEIS*LLYIETAVDKYP*VK*YAIRAFADTLDSVSMAFA 353
+ALCV+RNLIR IVYGG SAEIS + +ETA DKYP V+ YAIRAFAD LD+V MA A
Sbjct: 399 DALCVARNLIRNNSIVYGGGSAEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALA 458
Query: 354 LMLWTLSSWRLQKIEVSMPLKHYLR*YHSKENYPWCGVDYNDVGTIDMHEQNVFE 518
+ LQ IE +K KEN P+CG+D ND+GT DM EQNVFE
Sbjct: 459 ------ENSGLQPIETLSAVKS----QQIKENNPYCGIDCNDIGTNDMREQNVFE 503
Score = 64.7 bits (156), Expect = 2e-08
Identities = 46/93 (49%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Frame = +2
Query: 353 ADALDSVLMALAENRGLHAIETLSAVISQQGELSLVWCRL**CWHD*HA*AEC----L*D 520
ADALD+V MALAEN GL IETLSAV SQQ + + +C + +C D
Sbjct: 447 ADALDAVPMALAENSGLQPIETLSAVKSQQIKENNPYCGI-----------DCNDIGTND 495
Query: 521 I*DSNSS----GKQQQLLFATQVVSMILKIDDI 607
+ + N GKQQQ+L ATQVV MILKIDD+
Sbjct: 496 MREQNVFETLIGKQQQILLATQVVKMILKIDDV 528
>gb|AAD11431.1| T-complex protein 1 epsilon subunit, partial [Mesembryanthemum
crystallinum]
Length = 418
Score = 105 bits (262), Expect = 1e-20
Identities = 64/120 (53%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Frame = +3
Query: 174 NALCVSRNLIRKIFIVYGGVSAEIS*LLYIETAVDKYP*VK*YAIRAFADTLDSVSMAFA 353
+ALCV+RNLIR IVYGG SAEI+ L +E A D+YP V+ YAIRAFAD LDSV MA A
Sbjct: 283 DALCVARNLIRNNSIVYGGGSAEIACSLAVEAAADRYPGVEQYAIRAFADALDSVPMALA 342
Query: 354 -----LMLWTLSSWRLQKIEVSMPLKHYLR*YHSKENYPWCGVDYNDVGTIDMHEQNVFE 518
+ TLS+ + Q++ KEN P CG+D NDVGT DM EQNVFE
Sbjct: 343 ENSGLTPIETLSAVKSQQV---------------KENNPCCGIDCNDVGTNDMREQNVFE 387
Score = 63.2 bits (152), Expect = 7e-08
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Frame = +2
Query: 353 ADALDSVLMALAENRGLHAIETLSAVISQQGELSLVWCRL**CWHD*HA*AEC----L*D 520
ADALDSV MALAEN GL IETLSAV SQQ + + C + +C D
Sbjct: 331 ADALDSVPMALAENSGLTPIETLSAVKSQQVKENNPCCGI-----------DCNDVGTND 379
Query: 521 I*DSNSS----GKQQQLLFATQVVSMILKIDDI 607
+ + N GK+QQLL ATQVV MILKIDD+
Sbjct: 380 MREQNVFETLIGKKQQLLLATQVVKMILKIDDV 412
>emb|CBI16835.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 105 bits (262), Expect = 1e-20
Identities = 62/115 (53%), Positives = 74/115 (64%)
Frame = +3
Query: 174 NALCVSRNLIRKIFIVYGGVSAEIS*LLYIETAVDKYP*VK*YAIRAFADTLDSVSMAFA 353
+ALCV+RNLIR IVYGG SAEIS + +E A D+YP V+ YAIRAF D LDS+ MA A
Sbjct: 345 DALCVARNLIRSNSIVYGGGSAEISCSIAVEAAADRYPGVEQYAIRAFGDALDSIPMALA 404
Query: 354 LMLWTLSSWRLQKIEVSMPLKHYLR*YHSKENYPWCGVDYNDVGTIDMHEQNVFE 518
+ LQ IE +K KE+ P+CG+D NDVGT DM EQNVFE
Sbjct: 405 ------ENSGLQPIETLSAVKS----QQIKEDNPYCGIDCNDVGTNDMQEQNVFE 449
Score = 63.5 bits (153), Expect = 5e-08
Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Frame = +2
Query: 356 DALDSVLMALAENRGLHAIETLSAVISQQGELSLVWCRL**CWHD*HA*AEC----L*DI 523
DALDS+ MALAEN GL IETLSAV SQQ + +C + +C D+
Sbjct: 394 DALDSIPMALAENSGLQPIETLSAVKSQQIKEDNPYCGI-----------DCNDVGTNDM 442
Query: 524 *DSNSS----GKQQQLLFATQVVSMILKIDDI 607
+ N GKQQQ+L ATQVV MILKIDD+
Sbjct: 443 QEQNVFETLIGKQQQILLATQVVKMILKIDDV 474