BLASTX nr result

ID: Cnidium21_contig00042856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042856
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267...   121   5e-26
emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]   121   5e-26
ref|XP_002298910.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002524522.1| protein with unknown function [Ricinus commu...   105   4e-21
ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana] ...   103   2e-20

>ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267416 [Vitis vinifera]
           gi|302142872|emb|CBI20167.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/103 (60%), Positives = 78/103 (75%)
 Frame = -2

Query: 430 ALFGCPSLSKKPLMAAKALRIFFSIPEDTVCSKCVLKESCKFVNQSIWKGEGKRMRLDMS 251
           ALFGCPSLS+K + AAK LR FF I E+ VCSKCVLK+SCKFVNQS+WKG+ K   L++S
Sbjct: 230 ALFGCPSLSRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTK--SLNLS 287

Query: 250 AVMNVLMLYAMXXXXXXXXXPDEIKTAVSRLLEEVMKLSKTVS 122
            VM +L LYAM         PDE+K +V RLL+EV++LS+TV+
Sbjct: 288 VVMRLLTLYAMESMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330


>emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]
          Length = 330

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/103 (60%), Positives = 78/103 (75%)
 Frame = -2

Query: 430 ALFGCPSLSKKPLMAAKALRIFFSIPEDTVCSKCVLKESCKFVNQSIWKGEGKRMRLDMS 251
           ALFGCPSLS+K + AAK LR FF I E+ VCSKCVLK+SCKFVNQS+WKG+ K   L++S
Sbjct: 230 ALFGCPSLSRKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTK--SLNLS 287

Query: 250 AVMNVLMLYAMXXXXXXXXXPDEIKTAVSRLLEEVMKLSKTVS 122
            VM +L LYAM         PDE+K +V RLL+EV++LS+TV+
Sbjct: 288 VVMRLLTLYAMESMPPQLVLPDEVKASVGRLLKEVLRLSETVA 330


>ref|XP_002298910.1| predicted protein [Populus trichocarpa] gi|222846168|gb|EEE83715.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/102 (53%), Positives = 74/102 (72%)
 Frame = -2

Query: 430 ALFGCPSLSKKPLMAAKALRIFFSIPEDTVCSKCVLKESCKFVNQSIWKGEGKRMRLDMS 251
           ALFGCP+L +K + +AK LR FF I E TVC+KCVLK SC FVNQS+W+G+ K   L+++
Sbjct: 100 ALFGCPTLMRKSVFSAKRLRNFFEIQEATVCNKCVLKHSCNFVNQSVWRGDIK--TLNLA 157

Query: 250 AVMNVLMLYAMXXXXXXXXXPDEIKTAVSRLLEEVMKLSKTV 125
            VM V+ LYA+         P+EIK +V+RLL E++KLS+TV
Sbjct: 158 VVMRVITLYALEAVHPELSVPNEIKASVNRLLTEILKLSQTV 199


>ref|XP_002524522.1| protein with unknown function [Ricinus communis]
           gi|223536196|gb|EEF37849.1| protein with unknown
           function [Ricinus communis]
          Length = 299

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/103 (52%), Positives = 72/103 (69%)
 Frame = -2

Query: 430 ALFGCPSLSKKPLMAAKALRIFFSIPEDTVCSKCVLKESCKFVNQSIWKGEGKRMRLDMS 251
           ALFGCPSL+KK + +AK LR +  I ED VC+KCVL+ SCKFVNQS+W  + K   L++ 
Sbjct: 199 ALFGCPSLAKKNVFSAKRLRKYLEIQEDIVCNKCVLRHSCKFVNQSVWNSDYK--TLNLV 256

Query: 250 AVMNVLMLYAMXXXXXXXXXPDEIKTAVSRLLEEVMKLSKTVS 122
            +M V+ LYA+         PDEIK +V RLL+E++KLS+T S
Sbjct: 257 VLMRVITLYALELAHPDLPVPDEIKGSVRRLLKEILKLSQTTS 299


>ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8671880|gb|AAF78443.1|AC018748_22 Contains similarity
           to H+-ATPase FO-part b-subunit from Lactococcus lactis
           subsp. cremoris gb|AF059739 [Arabidopsis thaliana]
           gi|17386132|gb|AAL38612.1|AF446879_1 At1g53460/T3F20_21
           [Arabidopsis thaliana] gi|15450677|gb|AAK96610.1|
           At1g53460/T3F20_21 [Arabidopsis thaliana]
           gi|332194823|gb|AEE32944.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 314

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/101 (51%), Positives = 66/101 (65%)
 Frame = -2

Query: 427 LFGCPSLSKKPLMAAKALRIFFSIPEDTVCSKCVLKESCKFVNQSIWKGEGKRMRLDMSA 248
           LFGCPSL K+ + AAK LR FF I E+ VC KCVLKE CKF NQS+W  +GK   L +S 
Sbjct: 211 LFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCKFPNQSVW--DGKTKHLHLSV 268

Query: 247 VMNVLMLYAMXXXXXXXXXPDEIKTAVSRLLEEVMKLSKTV 125
           VM V+ LY +         P E++ +VSRLL E+  LS+T+
Sbjct: 269 VMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQNLSRTI 309


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