BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042846
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   285   8e-75
ref|XP_002308898.1| condensin complex components subunit [Populu...   284   1e-74
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   280   2e-73
ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. l...   272   5e-71
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   270   2e-70

>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  285 bits (728), Expect = 8e-75
 Identities = 146/227 (64%), Positives = 179/227 (78%)
 Frame = +2

Query: 2    GTTAEQSRGALFVLCMAAKSSPGVLGSHLQDIVDIGFGRWAKLDPLLARTACIALQRLSG 181
            GTTAEQSRGAL VLCMAAKSS GVLGSHLQDI+DIGFGRWAK++PLLAR AC+A+QRLS 
Sbjct: 691  GTTAEQSRGALSVLCMAAKSSTGVLGSHLQDIIDIGFGRWAKVEPLLARLACVAIQRLSA 750

Query: 182  EDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIYTIHPTPETFAADLVKK 361
            +D+KKLL  +GSR+FGILESLITG  LPENIWYAAADKAI+TIYTIHPTPET AAD+VKK
Sbjct: 751  DDRKKLLVSNGSRIFGILESLITGFWLPENIWYAAADKAISTIYTIHPTPETLAADIVKK 810

Query: 362  VVRSVFDFNGEDDLQTVSSTEYTNVLTKLEVTKLSRFLYIVSHIAMSQLVYIESCVRKIQ 541
             + S+FD +G +DLQ    +  T V+T ++V+KLSR+L+I+SH+AM+QL+YIESCVRKIQ
Sbjct: 811  SLSSIFDCSGGNDLQNNVESGSTAVVTAVQVSKLSRYLFIISHVAMNQLLYIESCVRKIQ 870

Query: 542  XXXXXXXXXXXXXXSVNCNGMTLPDADKENGINAELGLACTDDTVLD 682
                           V    +    + +EN INAELG+A ++D +LD
Sbjct: 871  -------KQKIKEKMVTDEALFFYSSLQENNINAELGVAASEDAILD 910


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  284 bits (726), Expect = 1e-74
 Identities = 144/227 (63%), Positives = 178/227 (78%)
 Frame = +2

Query: 2    GTTAEQSRGALFVLCMAAKSSPGVLGSHLQDIVDIGFGRWAKLDPLLARTACIALQRLSG 181
            GTT EQSRGAL VLCMAAK+SPGVLGSHLQDI+DIGFGRWAK+DPLLARTACIA+QRLS 
Sbjct: 685  GTTPEQSRGALSVLCMAAKASPGVLGSHLQDIIDIGFGRWAKVDPLLARTACIAIQRLSE 744

Query: 182  EDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIYTIHPTPETFAADLVKK 361
            ED+KKLL+ +GSR+FG LE+LI+GS LPEN WYAAADKAI  IYTIHPTPET AADLVKK
Sbjct: 745  EDKKKLLASNGSRVFGFLENLISGSWLPENTWYAAADKAIGVIYTIHPTPETLAADLVKK 804

Query: 362  VVRSVFDFNGEDDLQTVSSTEYTNVLTKLEVTKLSRFLYIVSHIAMSQLVYIESCVRKIQ 541
             + SVF  +G DDLQ    +   ++LT ++V K+SR+L++ SH+AM+QL+YIE+CVRKIQ
Sbjct: 805  SLSSVFICSGGDDLQNDIESGSADILTTVQVAKISRYLFVTSHVAMNQLLYIETCVRKIQ 864

Query: 542  XXXXXXXXXXXXXXSVNCNGMTLPDADKENGINAELGLACTDDTVLD 682
                          + + NG+   D  K+N INAELG++ ++D +LD
Sbjct: 865  KQKLKRDKLGADGQNGHNNGIKQDDTPKDN-INAELGVSASEDAILD 910


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  280 bits (716), Expect = 2e-73
 Identities = 149/227 (65%), Positives = 175/227 (77%)
 Frame = +2

Query: 2    GTTAEQSRGALFVLCMAAKSSPGVLGSHLQDIVDIGFGRWAKLDPLLARTACIALQRLSG 181
            GTTAEQSRGAL VLCMAAK S G+L SHLQDI+DIGFGRWAK++PLLARTAC+ALQRLS 
Sbjct: 682  GTTAEQSRGALSVLCMAAKLSHGILVSHLQDIIDIGFGRWAKVEPLLARTACVALQRLSE 741

Query: 182  EDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIYTIHPTPETFAADLVKK 361
             D+KKLLS +G+R+FGILESLIT   LPENIWYAAADKAI  IY IHPTPET A+DLV+K
Sbjct: 742  ADKKKLLSSNGTRIFGILESLITSFWLPENIWYAAADKAIGAIYVIHPTPETLASDLVQK 801

Query: 362  VVRSVFDFNGEDDLQTVSSTEYTNVLTKLEVTKLSRFLYIVSHIAMSQLVYIESCVRKIQ 541
             + SVFD  G D+LQ       ++VL+ ++VTKLSR+L+IVSH+AM+QL YIESCVR+IQ
Sbjct: 802  SLSSVFDCGGGDELQNDIENGGSSVLSTVQVTKLSRYLFIVSHVAMNQLTYIESCVRRIQ 861

Query: 542  XXXXXXXXXXXXXXSVNCNGMTLPDADKENGINAELGLACTDDTVLD 682
                           V  NGM    AD ENGINAELGLA ++D +LD
Sbjct: 862  KQKAKKDKIDAESQYVP-NGMA--SADVENGINAELGLAASEDAILD 905


>ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323969|gb|EFH54390.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1325

 Score =  272 bits (695), Expect = 5e-71
 Identities = 139/227 (61%), Positives = 172/227 (75%)
 Frame = +2

Query: 2    GTTAEQSRGALFVLCMAAKSSPGVLGSHLQDIVDIGFGRWAKLDPLLARTACIALQRLSG 181
            GTTAEQSRGAL +LCMAAKSSP +LGSH+QDI+DIGFGRWAK++PLLARTAC A+QRLS 
Sbjct: 681  GTTAEQSRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTAIQRLSE 740

Query: 182  EDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIYTIHPTPETFAADLVKK 361
            ED+KKLL  +GSRLFGILESLITG+ LPENI+YA ADKAI+ IY IHPTPE  A+ ++K 
Sbjct: 741  EDRKKLLLNNGSRLFGILESLITGNWLPENIYYATADKAISAIYMIHPTPEALASTIIKM 800

Query: 362  VVRSVFDFNGEDDLQTVSSTEYTNVLTKLEVTKLSRFLYIVSHIAMSQLVYIESCVRKIQ 541
             V +VFD  G+D+ QT +     ++LT ++VTKLSRFL+ +SHIAM+QLVYIESC++KI+
Sbjct: 801  SVSTVFDVVGQDEAQTDTVNNKVDILTPIQVTKLSRFLFAISHIAMNQLVYIESCIQKIR 860

Query: 542  XXXXXXXXXXXXXXSVNCNGMTLPDADKENGINAELGLACTDDTVLD 682
                            + N   L    + N INAELGLA +DD +LD
Sbjct: 861  RQKTKKDKSAAESQDTDEN---LGATQENNNINAELGLAASDDALLD 904


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646086|gb|AEE79607.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1415

 Score =  270 bits (690), Expect = 2e-70
 Identities = 138/227 (60%), Positives = 171/227 (75%)
 Frame = +2

Query: 2    GTTAEQSRGALFVLCMAAKSSPGVLGSHLQDIVDIGFGRWAKLDPLLARTACIALQRLSG 181
            GTTAEQSRGAL +LCMAAKSSP +LGSH+QDI+DIGFGRWAK++PLLARTAC  +QR S 
Sbjct: 678  GTTAEQSRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTVIQRFSE 737

Query: 182  EDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIYTIHPTPETFAADLVKK 361
            ED+KKLL  SGSRLFGILESLITG+ LPENI+YA ADKAI+ IY IHPTPET A+ ++KK
Sbjct: 738  EDRKKLLLSSGSRLFGILESLITGNWLPENIYYATADKAISAIYMIHPTPETLASTIIKK 797

Query: 362  VVRSVFDFNGEDDLQTVSSTEYTNVLTKLEVTKLSRFLYIVSHIAMSQLVYIESCVRKIQ 541
             + +VFD   +++ QT +     ++LT ++V KLSRFL+ VSHIAM+QLVYIESC++KI+
Sbjct: 798  SLSTVFDVVEQEEAQTDTENNKVDILTPVQVAKLSRFLFAVSHIAMNQLVYIESCIQKIR 857

Query: 542  XXXXXXXXXXXXXXSVNCNGMTLPDADKENGINAELGLACTDDTVLD 682
                          +   N   L    + NGINAELGLA +DD +LD
Sbjct: 858  RQKTKKDKPAAESQNTEEN---LEATQENNGINAELGLAASDDALLD 901