BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042805
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   105   3e-21
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    96   2e-18
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g...    92   3e-17
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|ABK93571.1| unknown [Populus trichocarpa]                           92   3e-17

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/65 (83%), Positives = 57/65 (87%), Gaps = 3/65 (4%)
 Frame = +1

Query: 118 MSSGRYMAYSPS---APHSPHIAALRSAASAIVEQEKYLSELIHERQKLSPFMPVLPNCY 288
           MSSGRYMAYSPS   APHSPHIA LRSA SA+VEQEKYLSEL+ ER KLSPFMPVLP+ Y
Sbjct: 1   MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60

Query: 289 RLLNQ 303
           RLLNQ
Sbjct: 61  RLLNQ 65


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/61 (77%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
 Frame = +1

Query: 127 GRYMAYSPS--APHSPHIAALRSAASAIVEQEKYLSELIHERQKLSPFMPVLPNCYRLLN 300
           GR+MAYSPS  APHSPH++ LRSA+SA+VEQEKYLSEL+ ER KLSPFMPVLP+ YRLL+
Sbjct: 15  GRFMAYSPSPSAPHSPHLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLLS 74

Query: 301 Q 303
           Q
Sbjct: 75  Q 75


>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
           sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
           domain-containing protein At5g56140-like [Cucumis
           sativus]
          Length = 296

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 6/67 (8%)
 Frame = +1

Query: 121 SSGRYMAYSPS--APHSPHIAALRS----AASAIVEQEKYLSELIHERQKLSPFMPVLPN 282
           ++G YMA+SPS  APHSPH+  LRS    +A+AI+EQEKYLSEL+ ERQKLSPFMPVLPN
Sbjct: 5   AAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLPN 64

Query: 283 CYRLLNQ 303
            YRLLNQ
Sbjct: 65  SYRLLNQ 71


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/67 (68%), Positives = 57/67 (85%), Gaps = 5/67 (7%)
 Frame = +1

Query: 118 MSSGRYMAYSPS--APHSPHIAALRSAASA---IVEQEKYLSELIHERQKLSPFMPVLPN 282
           + +GR+MAYSPS  APHSPHI+ LRS+A++   +VEQEKYLSEL+ ER K+SPF+PVLPN
Sbjct: 11  VGAGRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPN 70

Query: 283 CYRLLNQ 303
            YRLLNQ
Sbjct: 71  TYRLLNQ 77


>gb|ABK93571.1| unknown [Populus trichocarpa]
          Length = 89

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/67 (68%), Positives = 57/67 (85%), Gaps = 5/67 (7%)
 Frame = +1

Query: 118 MSSGRYMAYSPS--APHSPHIAALRSAASA---IVEQEKYLSELIHERQKLSPFMPVLPN 282
           + +GR+MAYSPS  APHSPHI+ LRS+A++   +VEQEKYLSEL+ ER K+SPF+PVLPN
Sbjct: 11  VGAGRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPN 70

Query: 283 CYRLLNQ 303
            YRLLNQ
Sbjct: 71  TYRLLNQ 77