BLASTX nr result

ID: Cnidium21_contig00042764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042764
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541178.1| PREDICTED: probable E3 ubiquitin-protein lig...   110   9e-23
ref|XP_003537943.1| PREDICTED: probable E3 ubiquitin-protein lig...   110   1e-22
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_004167703.1| PREDICTED: probable E3 ubiquitin-protein lig...   109   3e-22
ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein lig...   109   3e-22

>ref|XP_003541178.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
           max]
          Length = 586

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = -1

Query: 279 ERVRKKVGLVNKTYID--DSIEFTCGICFDVFPAHDKIIGSCDHMYCSTCLGTYISTSIE 106
           ERVRK VGL+ K  +   ++ E TCGICF+ +P     + SC H YC +C   YISTSI 
Sbjct: 110 ERVRKAVGLLEKPIVQHPNTRELTCGICFENYPRARIEMASCGHPYCISCWEGYISTSIN 169

Query: 105 EGPGCLSLRCPDPSCKAAIGVDMVHLLVSDKYRKK 1
           +GPGCL LRCPDP+C AAIG DM++LLVSD+ ++K
Sbjct: 170 DGPGCLMLRCPDPTCDAAIGQDMINLLVSDEDKQK 204


>ref|XP_003537943.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
           max]
          Length = 586

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = -1

Query: 279 ERVRKKVGLVNKTYID--DSIEFTCGICFDVFPAHDKIIGSCDHMYCSTCLGTYISTSIE 106
           ERVRK VGL+ K  +   ++ E TCGICF+ +P     + SC H YC +C   YISTSI 
Sbjct: 110 ERVRKAVGLLEKPIVQHPNARELTCGICFENYPRARIEMASCGHPYCISCWEGYISTSIN 169

Query: 105 EGPGCLSLRCPDPSCKAAIGVDMVHLLVSDKYRKK 1
           +GPGCL LRCPDP+C AAIG DM++LLVSD+ ++K
Sbjct: 170 DGPGCLMLRCPDPTCGAAIGQDMINLLVSDEDKQK 204


>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
 Frame = -1

Query: 279 ERVRKKVGLVNKTYID--DSIEFTCGICFDVFPAHDKIIGSCDHMYCSTCLGTYISTSIE 106
           E+VRK VGL+ +  +   D  E TCGICF+ +P+   +  +C H +C++C   YIST+I 
Sbjct: 115 EKVRKAVGLLEEPVVPFPDGREMTCGICFETYPSDRLLAAACGHPFCNSCWAGYISTAIN 174

Query: 105 EGPGCLSLRCPDPSCKAAIGVDMVHLLVSDKYRKK 1
           +GPGCL LRCPDPSC AAIG DM++LL SD+  +K
Sbjct: 175 DGPGCLMLRCPDPSCNAAIGQDMINLLTSDEDSEK 209


>ref|XP_004167703.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Cucumis
           sativus]
          Length = 327

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = -1

Query: 279 ERVRKKVGLVNKTYIDDS--IEFTCGICFDVFPAHDKIIGSCDHMYCSTCLGTYISTSIE 106
           E+VR+ VGL+ K  +  S  +E  CGICF+++P       +C H +C+ C   YISTSI 
Sbjct: 122 EKVRRSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTGYISTSIN 181

Query: 105 EGPGCLSLRCPDPSCKAAIGVDMVHLLVSDKYRKK 1
           +GPGCL LRCPDPSC AA+G DM++LLVSD  +KK
Sbjct: 182 DGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEKKK 216


>ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
           sativus]
          Length = 597

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
 Frame = -1

Query: 279 ERVRKKVGLVNKTYIDDS--IEFTCGICFDVFPAHDKIIGSCDHMYCSTCLGTYISTSIE 106
           E+VR+ VGL+ K  +  S  +E  CGICF+++P       +C H +C+ C   YISTSI 
Sbjct: 122 EKVRRSVGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTGYISTSIN 181

Query: 105 EGPGCLSLRCPDPSCKAAIGVDMVHLLVSDKYRKK 1
           +GPGCL LRCPDPSC AA+G DM++LLVSD  +KK
Sbjct: 182 DGPGCLMLRCPDPSCGAAVGQDMINLLVSDDEKKK 216


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