BLASTX nr result

ID: Cnidium21_contig00042735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042735
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   196   2e-48
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   179   2e-43
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   177   8e-43
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...   176   1e-42
ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   174   5e-42

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  196 bits (497), Expect = 2e-48
 Identities = 88/128 (68%), Positives = 104/128 (81%)
 Frame = +3

Query: 3   GVMVEYEFLVKWVGKSHLHNSWISESHLKILAKRKLDNYKAKYGRSLIDVSDERWKRPQR 182
           G MV YEFLVKWVGKSH+HNSWISES LK+LAKRKL+NYKAKYG ++I++ +E+WK+PQR
Sbjct: 609 GEMVSYEFLVKWVGKSHIHNSWISESQLKLLAKRKLENYKAKYGMAVINICEEQWKQPQR 668

Query: 183 VIALHSVADGPAEVLVKWTALPYDECTWERLDEPVIARSSRLVDLFNQFECRTVENDATN 362
           VIAL +  DG  E  VKW  LPYDECTWERLDEPV+ +SS L+D +NQFE  T+E DA  
Sbjct: 669 VIALRASKDGTTEAFVKWNGLPYDECTWERLDEPVVEKSSHLIDAYNQFEKETLEKDAAK 728

Query: 363 DDTLRGKG 386
           DD  RGKG
Sbjct: 729 DDLPRGKG 736


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223537108|gb|EEF38742.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 2257

 Score =  179 bits (454), Expect = 2e-43
 Identities = 80/124 (64%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
 Frame = +3

Query: 18  YEFLVKWVGKSHLHNSWISESHLKILAKRKLDNYKAKYGRSLIDVSDERWKRPQRVIALH 197
           YEFLVKWVGKSH+HNSWISES LK+LAKRKLDNYKAKYG ++I++ +++WK+PQRVIA+ 
Sbjct: 526 YEFLVKWVGKSHIHNSWISESQLKVLAKRKLDNYKAKYGTAVINICEDKWKQPQRVIAVR 585

Query: 198 SVADGPAEVLVKWTALPYDECTWERLDEPVIARSSRLVDLFNQFECRTVENDATND-DTL 374
           +  DG  E  VKWT LPYDECTWERLDEP++ +SS LVDLF+Q E +T+E D+  +   +
Sbjct: 586 ASRDGTQEAFVKWTGLPYDECTWERLDEPLMLKSSHLVDLFDQLEQQTLEKDSRGETPII 645

Query: 375 RGKG 386
           +G+G
Sbjct: 646 KGRG 649


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222871157|gb|EEF08288.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2332

 Score =  177 bits (449), Expect = 8e-43
 Identities = 78/122 (63%), Positives = 99/122 (81%)
 Frame = +3

Query: 18  YEFLVKWVGKSHLHNSWISESHLKILAKRKLDNYKAKYGRSLIDVSDERWKRPQRVIALH 197
           YEFLVKWVG+SH+HNSWISES LK LAKRKL+NYKAKYG +LI++ +E+WK+PQRVIAL 
Sbjct: 603 YEFLVKWVGRSHIHNSWISESQLKALAKRKLENYKAKYGTALINICEEKWKQPQRVIALR 662

Query: 198 SVADGPAEVLVKWTALPYDECTWERLDEPVIARSSRLVDLFNQFECRTVENDATNDDTLR 377
           +  DG  E  VKWT LPYDECTWE LD+PV+ +S  L++ F+QFE +T+E D+  DD  +
Sbjct: 663 ASEDGSREAFVKWTGLPYDECTWESLDDPVLKKSVHLINQFSQFERQTLEKDSARDDLQK 722

Query: 378 GK 383
           G+
Sbjct: 723 GR 724


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score =  176 bits (447), Expect = 1e-42
 Identities = 76/114 (66%), Positives = 94/114 (82%)
 Frame = +3

Query: 18   YEFLVKWVGKSHLHNSWISESHLKILAKRKLDNYKAKYGRSLIDVSDERWKRPQRVIALH 197
            YEFLVKWVGKSH+HNSWISESHLK+LAKRKL+NYKAKYG  +I++ +++WK PQRVIAL 
Sbjct: 663  YEFLVKWVGKSHIHNSWISESHLKVLAKRKLENYKAKYGTLVINICEDKWKHPQRVIALR 722

Query: 198  SVADGPAEVLVKWTALPYDECTWERLDEPVIARSSRLVDLFNQFECRTVENDAT 359
            S  DG  E  +KW+ LPYDECTWE+LDEPV+  S  L+ LFN FE +T+E D++
Sbjct: 723  SCKDGGQEAFIKWSGLPYDECTWEKLDEPVLKESPHLIQLFNDFEQKTIEKDSS 776


>ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228553,
            partial [Cucumis sativus]
          Length = 1851

 Score =  174 bits (442), Expect = 5e-42
 Identities = 75/114 (65%), Positives = 94/114 (82%)
 Frame = +3

Query: 18   YEFLVKWVGKSHLHNSWISESHLKILAKRKLDNYKAKYGRSLIDVSDERWKRPQRVIALH 197
            YEFLVKWVGKSH+HNSWISESHLK+LAKRKL+NYKAKYG  +I++ +++WK PQRVIAL 
Sbjct: 659  YEFLVKWVGKSHIHNSWISESHLKVLAKRKLENYKAKYGTLVINICEDKWKHPQRVIALR 718

Query: 198  SVADGPAEVLVKWTALPYDECTWERLDEPVIARSSRLVDLFNQFECRTVENDAT 359
            S  DG  E  +KW+ LPYDECTWE+LDEPV+  S  L+ LF+ FE +T+E D++
Sbjct: 719  SCKDGGQEAFIKWSGLPYDECTWEKLDEPVLKESPHLIQLFSDFEQKTIEKDSS 772


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