BLASTX nr result

ID: Cnidium21_contig00042726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042726
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]    62   6e-08
ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -3

Query: 292 GKEFFEVLKGKGFVVDEKEVREVLKGRRGPEFRGVMDILFGK 167
           G+EF E +K KGF  DEK VRE+LK RRG  FR +MDILFGK
Sbjct: 266 GREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 307


>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -3

Query: 292 GKEFFEVLKGKGFVVDEKEVREVLKGRRGPEFRGVMDILFGK 167
           G+EF E +K KGF  DEK VRE+LK RRG  FR +MDILFGK
Sbjct: 306 GREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347


>ref|XP_003555763.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 289

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 277 EVLKGKGFVVDEKEVREVLKGRRGPEFRGVMDILFGK 167
           E +KGKGFV DEK VREVL  +RGP FR V+D+LFGK
Sbjct: 253 EQMKGKGFVPDEKAVREVLASKRGPVFRNVIDVLFGK 289


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