BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042709
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-18
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-17
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...    64   1e-16
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...    64   1e-16
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]    64   1e-16

>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score = 68.6 bits (166), Expect(2) = 6e-18
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 352 VSKVCTEVETHLGFSDKIVAEFITELGRDCESVDVFDA 239
           VSKVC+E+ETHLGF DKI+AEFITELGR CE+VD FDA
Sbjct: 20  VSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDA 57



 Score = 47.0 bits (110), Expect(2) = 6e-18
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 249 FSMLLKENGADLPDYVVRTLLFVIHAILP 163
           F   LKENGA++PDY VRTLL +IHAILP
Sbjct: 55  FDAKLKENGAEMPDYFVRTLLTIIHAILP 83


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score = 67.4 bits (163), Expect(2) = 1e-17
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -3

Query: 352 VSKVCTEVETHLGFSDKIVAEFITELGRDCESVDVFDA 239
           VSKVC+E+ETHLGF DKI+AEFITELGR C++VD FDA
Sbjct: 20  VSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDA 57



 Score = 47.0 bits (110), Expect(2) = 1e-17
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -1

Query: 249 FSMLLKENGADLPDYVVRTLLFVIHAILP 163
           F   LKENGA++PDY VRTLL +IHAILP
Sbjct: 55  FDAKLKENGAEMPDYFVRTLLTIIHAILP 83


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score = 63.5 bits (153), Expect(2) = 1e-16
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 352 VSKVCTEVETHLGFSDKIVAEFITELGRDCESVDVFDA 239
           VSKVCTE+ETHLG  DK++AEFIT++GR CE+VD FD+
Sbjct: 19  VSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDS 56



 Score = 47.8 bits (112), Expect(2) = 1e-16
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -1

Query: 249 FSMLLKENGADLPDYVVRTLLFVIHAILPLNVKQLD 142
           F   LKENGA++PDY VRTLL +IHAILP   K  D
Sbjct: 54  FDSKLKENGAEMPDYFVRTLLTIIHAILPPKPKSDD 89


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score = 63.5 bits (153), Expect(2) = 1e-16
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 352 VSKVCTEVETHLGFSDKIVAEFITELGRDCESVDVFDA 239
           VSKVCTE+ETHLG  DK++AEFIT++GR CE+VD FD+
Sbjct: 19  VSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDS 56



 Score = 47.8 bits (112), Expect(2) = 1e-16
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -1

Query: 249 FSMLLKENGADLPDYVVRTLLFVIHAILPLNVKQLD 142
           F   LKENGA++PDY VRTLL +IHAILP   K  D
Sbjct: 54  FDSKLKENGAEMPDYFVRTLLTIIHAILPPKPKSDD 89


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score = 63.5 bits (153), Expect(2) = 1e-16
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 352 VSKVCTEVETHLGFSDKIVAEFITELGRDCESVDVFDA 239
           VSKVCTE+ETHLG  DK++AEFIT++GR CE+VD FD+
Sbjct: 19  VSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDS 56



 Score = 47.8 bits (112), Expect(2) = 1e-16
 Identities = 23/36 (63%), Positives = 26/36 (72%)
 Frame = -1

Query: 249 FSMLLKENGADLPDYVVRTLLFVIHAILPLNVKQLD 142
           F   LKENGA++PDY VRTLL +IHAILP   K  D
Sbjct: 54  FDSKLKENGAEMPDYFVRTLLTIIHAILPPKPKSDD 89