BLASTX nr result

ID: Cnidium21_contig00042690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042690
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   184   8e-45
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   173   1e-41
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   159   3e-37
ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   157   8e-37

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/145 (62%), Positives = 114/145 (78%)
 Frame = +2

Query: 2   SERTVTVPPRVRLPTSDECYYVRDSGTKAESQSLEENQTESLRLKLDISVKGNCVPAPIL 181
           S   V +PP  RLPT+DEC+YVRDSG K+ SQSL  +QTE LR +L+I V+G+   +PIL
Sbjct: 78  SRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEICVRGDFDLSPIL 137

Query: 182 SFASCNIPCKLLENIEVSGYEMPTPVQMQAIPTALKGQSLLVSAETGSGKTASYMIPVVS 361
           SF+SCN+P KLL+NIE +GYE+PTPVQMQAIP AL G++LLVSA+TGSGKTAS+++P+VS
Sbjct: 138 SFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTASFLVPIVS 197

Query: 362 YCAQFKHEQSSKMKRPLAMVLAPTR 436
            C   + + S   K PLAMVL PTR
Sbjct: 198 RCTSIRPDHSPNQKNPLAMVLTPTR 222


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  173 bits (438), Expect = 1e-41
 Identities = 87/145 (60%), Positives = 113/145 (77%)
 Frame = +2

Query: 2   SERTVTVPPRVRLPTSDECYYVRDSGTKAESQSLEENQTESLRLKLDISVKGNCVPAPIL 181
           S+ +V +PP  RL  +DEC+YVR++GT     SL  +QTE LR  L+I VKG  VP PIL
Sbjct: 65  SDISVGIPPPRRLAATDECFYVRENGTS----SLTNDQTELLRRTLEIHVKGELVPDPIL 120

Query: 182 SFASCNIPCKLLENIEVSGYEMPTPVQMQAIPTALKGQSLLVSAETGSGKTASYMIPVVS 361
           SF+SCN+P KLL N+E +GY++PTPVQMQAIPTAL G+SLL SA+TGSGKTASY++P++S
Sbjct: 121 SFSSCNLPQKLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIIS 180

Query: 362 YCAQFKHEQSSKMKRPLAMVLAPTR 436
            CA ++ + SS  ++PLAMVL PTR
Sbjct: 181 SCASYRLQHSSD-RKPLAMVLTPTR 204


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/134 (62%), Positives = 101/134 (75%)
 Frame = +2

Query: 35  RLPTSDECYYVRDSGTKAESQSLEENQTESLRLKLDISVKGNCVPAPILSFASCNIPCKL 214
           RL  +DEC+YVRDS        L  +QTE LR KL+I VKG+ VP PILSF+SCN+P KL
Sbjct: 81  RLAATDECFYVRDS-----ESPLTSDQTELLRRKLEIHVKGDSVPDPILSFSSCNLPEKL 135

Query: 215 LENIEVSGYEMPTPVQMQAIPTALKGQSLLVSAETGSGKTASYMIPVVSYCAQFKHEQSS 394
           L NI+  GY+MPTP+QMQ I  AL G+SLL SA+TGSGKTAS+++PVVS CA F+H   S
Sbjct: 136 LHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGNIS 195

Query: 395 KMKRPLAMVLAPTR 436
           K K+PLAMVL PTR
Sbjct: 196 KSKKPLAMVLTPTR 209


>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score =  159 bits (401), Expect = 3e-37
 Identities = 83/137 (60%), Positives = 102/137 (74%)
 Frame = +2

Query: 26  PRVRLPTSDECYYVRDSGTKAESQSLEENQTESLRLKLDISVKGNCVPAPILSFASCNIP 205
           P  RLP +DEC+YV++S     S SL   QTE LR KL IS+KG+   APILSF+  N+P
Sbjct: 85  PSKRLPAADECFYVKESNY---SSSLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGNLP 141

Query: 206 CKLLENIEVSGYEMPTPVQMQAIPTALKGQSLLVSAETGSGKTASYMIPVVSYCAQFKHE 385
            KL +N+E +GYEMPTPVQMQAIP A  G++LLVSAETGSGKT SY++P+VSYCA+ + E
Sbjct: 142 QKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARARLE 201

Query: 386 QSSKMKRPLAMVLAPTR 436
                K+PLAMVL PTR
Sbjct: 202 CFHGEKKPLAMVLTPTR 218


>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/138 (58%), Positives = 104/138 (75%)
 Frame = +2

Query: 23  PPRVRLPTSDECYYVRDSGTKAESQSLEENQTESLRLKLDISVKGNCVPAPILSFASCNI 202
           PP   +P +DEC+YVRDS  K+ + S+  +    LR KLDI VKG+ V AP+LSF++CN+
Sbjct: 81  PPPKTIPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGDVV-APVLSFSACNL 135

Query: 203 PCKLLENIEVSGYEMPTPVQMQAIPTALKGQSLLVSAETGSGKTASYMIPVVSYCAQFKH 382
           P KLL NIE +GYEMPTPVQMQAIP AL G+S+LV A+TGSGK+AS++IP+VS C   + 
Sbjct: 136 PDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIPIVSRCVIHRR 195

Query: 383 EQSSKMKRPLAMVLAPTR 436
           +  S  K+PLAMVL PTR
Sbjct: 196 QYFSGKKKPLAMVLTPTR 213


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