BLASTX nr result

ID: Cnidium21_contig00042618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042618
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002336618.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002337269.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   113   1e-23

>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/86 (63%), Positives = 69/86 (80%)
 Frame = -2

Query: 365 NSMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKE 186
           NSMITSLGVHG G+EA++LF  ME ANV+PDAITFVGVL AC++ N+VE G + F YM E
Sbjct: 332 NSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVNTNNVEAGYRYFKYMTE 391

Query: 185 RYGIEPIQEHYSCMLELHNRESMMEE 108
            YGI P+ EHY+CM+EL+ R +M+ E
Sbjct: 392 HYGITPMLEHYTCMIELYTRAAMLNE 417


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 474

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/90 (58%), Positives = 70/90 (77%)
 Frame = -2

Query: 365 NSMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKE 186
           N+MITSLGVHG  +EA+S+F +ME AN  PDAITFVGVLSAC+++ND+E   K F+ M +
Sbjct: 324 NTMITSLGVHGYRDEALSIFEEMEKANEVPDAITFVGVLSACVYMNDLELAQKYFNLMTD 383

Query: 185 RYGIEPIQEHYSCMLELHNRESMMEEAYMN 96
            YGI PI EHY+CM+E+H R   ++E YM+
Sbjct: 384 HYGITPILEHYTCMVEIHTRAIKLDEIYMS 413


>ref|XP_002336618.1| predicted protein [Populus trichocarpa] gi|222836344|gb|EEE74751.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = -2

Query: 365 NSMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKE 186
           N+MITSLGVHG GEEA+SLFT ME ANV+PDAITFVGVL AC+  + V  G   F YM+E
Sbjct: 27  NAMITSLGVHGYGEEALSLFTKMEEANVRPDAITFVGVLCACLQTDKVREGDMYFKYMRE 86

Query: 185 RYGIEPIQEHYSCMLELHNRESMM 114
            YGI P+ EHY+CM+EL++R +++
Sbjct: 87  HYGITPVVEHYTCMIELYSRANLL 110


>ref|XP_002337269.1| predicted protein [Populus trichocarpa] gi|222838658|gb|EEE77023.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/84 (61%), Positives = 67/84 (79%)
 Frame = -2

Query: 365 NSMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKE 186
           N+MITSLGVHG GEEA+SLFT ME ANV+PDAITFVGV+ AC+  + V  G   F YM+E
Sbjct: 10  NAMITSLGVHGYGEEALSLFTKMEEANVRPDAITFVGVICACLQTDKVREGDMYFKYMRE 69

Query: 185 RYGIEPIQEHYSCMLELHNRESMM 114
            YGI P+ EHY+CM+EL++R +++
Sbjct: 70  HYGITPVVEHYTCMIELYSRANLL 93


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = -2

Query: 365 NSMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKE 186
           NSMITSLGVHG G+EA++LF++ME  NV+PDAITF+GVL AC+H+ +V+ G   F  M +
Sbjct: 327 NSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ 386

Query: 185 RYGIEPIQEHYSCMLELHNRESMMEEAY 102
            YGI PI EHY CM EL+ R + ++EA+
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEAF 414



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/87 (45%), Positives = 54/87 (62%)
 Frame = -2

Query: 362  SMITSLGVHGCGEEAISLFTDMEIANVQPDAITFVGVLSACIHLNDVETGGKLFDYMKER 183
            +M+   G+HG  +EA+ +F  M  A V+P+ ITFV VL+AC H   VE G   F+ MK +
Sbjct: 1424 AMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHK 1483

Query: 182  YGIEPIQEHYSCMLELHNRESMMEEAY 102
            Y IEP  EHY CM++L  R   + EAY
Sbjct: 1484 YDIEPGIEHYGCMVDLFGRAGCLNEAY 1510


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