BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042613
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...    77   2e-12
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    76   3e-12
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    74   1e-11
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    74   2e-11
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    72   6e-11

>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
 Frame = +3

Query: 6   GLQAILDGCPNLQSLDLRGCFSLNLNESCGKLCKERIKNLRLPGDSMEGH--KVAPYD-- 173
           GL+AILDGCP L+SLD+R CF+L+L  S GK C+E+IK+LRLP D+ E +  +V  YD  
Sbjct: 39  GLRAILDGCPLLESLDIRQCFNLSLRGSLGKKCREQIKDLRLPYDATEDYPFQVIAYDYG 98

Query: 174 -SEDDYDYCDG--GLTESSDDDY 233
             ++D DY  G   +   SDDDY
Sbjct: 99  SPDEDEDYPSGISDMDLLSDDDY 121


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/82 (46%), Positives = 54/82 (65%)
 Frame = +3

Query: 6   GLQAILDGCPNLQSLDLRGCFSLNLNESCGKLCKERIKNLRLPGDSMEGHKVAPYDSEDD 185
           GL+AILDGCP+L+SLD+R CF+L+L  S GK C+E+IK LRLP D+ + +   P+  E  
Sbjct: 219 GLRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIKYLRLPYDATDDY---PFRVELH 275

Query: 186 YDYCDGGLTESSDDDYSGVVAE 251
           Y Y      E  D+DY   +++
Sbjct: 276 YGYGSHDEDEDEDEDYPSGISD 297


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
 Frame = +3

Query: 3   KGLQAILDGCPNLQSLDLRGCFSLNLNESCGKLCKERIKNLRLPGDSMEGHKVAPYDSED 182
           +GL AILDGCP L+SLDLR CF++NL  S GK C E+IK LRLP D  + +   P+++E 
Sbjct: 206 EGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDPTDDY---PFEAEI 262

Query: 183 DY-----DYCDG--GLTESSDDDY 233
           DY     DY  G   +   SDDDY
Sbjct: 263 DYGSLDEDYPSGISDIDFLSDDDY 286


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 51/77 (66%)
 Frame = +3

Query: 3   KGLQAILDGCPNLQSLDLRGCFSLNLNESCGKLCKERIKNLRLPGDSMEGHKVAPYDSED 182
           +GL AILDGCP+L+SLDLR CF++NL  S GK C E+IK LRLP D  +     P++++ 
Sbjct: 214 EGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDPTDD---CPFEADV 270

Query: 183 DYDYCDGGLTESSDDDY 233
           DY   D   +  SD D+
Sbjct: 271 DYGSLDEDSSAISDIDF 287


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
 Frame = +3

Query: 6   GLQAILDGCPNLQSLDLRGCFSLNLNESCGKLCKERIKNLRLPGDSMEGHKVAPYDSEDD 185
           GL A+LDGCP+L+SLD+R CF++NL  + GK CKE+IK  RL           P+D+ DD
Sbjct: 226 GLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIKYFRL-----------PHDATDD 274

Query: 186 YDY----CDGGLTESSDDDYSGVVAEY 254
           Y +    CD G     D D S ++++Y
Sbjct: 275 YPFQTSECDYGSPVEDDADESDLMSDY 301