BLASTX nr result
ID: Cnidium21_contig00042609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042609 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, c... 135 5e-30 ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|2... 133 2e-29 ref|XP_004152365.1| PREDICTED: translocase of chloroplast 159, c... 132 4e-29 ref|XP_004156890.1| PREDICTED: translocase of chloroplast 159, c... 130 9e-29 ref|XP_002516922.1| GTP binding protein, putative [Ricinus commu... 128 6e-28 >ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Vitis vinifera] Length = 1465 Score = 135 bits (339), Expect = 5e-30 Identities = 71/107 (66%), Positives = 85/107 (79%) Frame = +3 Query: 3 LVQRLGMSDESSVVAKVLQRLIQVTEVQIGHPFVPDTAKNTALQLEKDGKEDLDCSLNIL 182 LVQRLG S E S+V +VL RL + Q G F DTAK A+QLE +GK+DL+ SLNIL Sbjct: 765 LVQRLGHSPEDSIVGQVLYRLALLVGRQTGEEFSLDTAKRRAMQLEAEGKDDLNFSLNIL 824 Query: 183 VLGKSGVGKTATINAIFGEKKARVDAFQPATTTVKEIIGVADGVKIR 323 VLGKSGVGK+ATIN+IFGE+KA ++AF+PATTTV+EIIG DGVKIR Sbjct: 825 VLGKSGVGKSATINSIFGEQKALINAFEPATTTVREIIGTIDGVKIR 871 >ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|222832030|gb|EEE70507.1| predicted protein [Populus trichocarpa] Length = 861 Score = 133 bits (334), Expect = 2e-29 Identities = 64/107 (59%), Positives = 84/107 (78%) Frame = +3 Query: 3 LVQRLGMSDESSVVAKVLQRLIQVTEVQIGHPFVPDTAKNTALQLEKDGKEDLDCSLNIL 182 LVQRLG S E S+VA+VL RL+ T + F + A+ A+QLE +GK+DLD SL+IL Sbjct: 163 LVQRLGQSPEDSIVAQVLHRLVVATRAHVNQEFSLENAEKMAMQLEAEGKDDLDFSLSIL 222 Query: 183 VLGKSGVGKTATINAIFGEKKARVDAFQPATTTVKEIIGVADGVKIR 323 VLGK+GVGK+ATIN+IFGEKK ++AF+PATT +KE++G+ DGVKIR Sbjct: 223 VLGKTGVGKSATINSIFGEKKVEINAFEPATTMLKEVVGIVDGVKIR 269 >ref|XP_004152365.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Cucumis sativus] Length = 1528 Score = 132 bits (331), Expect = 4e-29 Identities = 71/107 (66%), Positives = 82/107 (76%) Frame = +3 Query: 3 LVQRLGMSDESSVVAKVLQRLIQVTEVQIGHPFVPDTAKNTALQLEKDGKEDLDCSLNIL 182 LVQRLG+S + S+VA+VL R V G F D AKNTA+QLE +GKEDLD SLNIL Sbjct: 829 LVQRLGVSPDDSLVAQVLYRFGLVAGRSTGQLFSFDNAKNTAIQLEAEGKEDLDFSLNIL 888 Query: 183 VLGKSGVGKTATINAIFGEKKARVDAFQPATTTVKEIIGVADGVKIR 323 VLGKSGVGK+ATIN+IFGE K ++AF P TTTVKEIIG +GVKIR Sbjct: 889 VLGKSGVGKSATINSIFGENKTPINAFGPGTTTVKEIIGTVEGVKIR 935 >ref|XP_004156890.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Cucumis sativus] Length = 1528 Score = 130 bits (328), Expect = 9e-29 Identities = 71/107 (66%), Positives = 81/107 (75%) Frame = +3 Query: 3 LVQRLGMSDESSVVAKVLQRLIQVTEVQIGHPFVPDTAKNTALQLEKDGKEDLDCSLNIL 182 LVQRLG+S + S+VA VL R V G F D AKNTA+QLE +GKEDLD SLNIL Sbjct: 829 LVQRLGVSPDDSLVAHVLYRFGLVAGRSTGQLFSFDNAKNTAIQLEAEGKEDLDFSLNIL 888 Query: 183 VLGKSGVGKTATINAIFGEKKARVDAFQPATTTVKEIIGVADGVKIR 323 VLGKSGVGK+ATIN+IFGE K ++AF P TTTVKEIIG +GVKIR Sbjct: 889 VLGKSGVGKSATINSIFGEDKTPINAFGPGTTTVKEIIGTVEGVKIR 935 >ref|XP_002516922.1| GTP binding protein, putative [Ricinus communis] gi|223544010|gb|EEF45536.1| GTP binding protein, putative [Ricinus communis] Length = 1381 Score = 128 bits (321), Expect = 6e-28 Identities = 63/107 (58%), Positives = 79/107 (73%) Frame = +3 Query: 3 LVQRLGMSDESSVVAKVLQRLIQVTEVQIGHPFVPDTAKNTALQLEKDGKEDLDCSLNIL 182 LV RLG+S E S V +VL RL+ + + H F + AK A+QLE +GK+DLD LNIL Sbjct: 696 LVHRLGLSPEDSTVVQVLHRLVLAAGLHVRHKFCNEFAKRMAMQLEAEGKDDLDFCLNIL 755 Query: 183 VLGKSGVGKTATINAIFGEKKARVDAFQPATTTVKEIIGVADGVKIR 323 V+GK+GVGK+AT+N+IFGEKK +DAF PATT VKEI G DGV+IR Sbjct: 756 VIGKTGVGKSATVNSIFGEKKVMIDAFDPATTKVKEIFGTIDGVRIR 802