BLASTX nr result

ID: Cnidium21_contig00042588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042588
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu...    57   2e-10
ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...    55   1e-09
emb|CBI29262.3| unnamed protein product [Vitis vinifera]               55   1e-09
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    52   3e-09
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...    52   3e-09

>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
           gi|223548632|gb|EEF50123.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 735

 Score = 57.4 bits (137), Expect(2) = 2e-10
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 13/63 (20%)
 Frame = -3

Query: 224 YNFSSCMQT-------------CSKCFKK*IGQGKRTCANCRHPVPPKMASNRSTNSSLE 84
           +N S CMQ              C KCF+K IGQGKRTCANCR+ +P KMAS    NS L 
Sbjct: 135 FNCSFCMQLPDRPVTTPCGHNFCLKCFQKWIGQGKRTCANCRNQIPSKMASQPRINSVLV 194

Query: 83  LLL 75
           + +
Sbjct: 195 IAI 197



 Score = 32.3 bits (72), Expect(2) = 2e-10
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -2

Query: 81  AVRMAKLSKGDCSKVQ*KVYQFIHNQD 1
           A+RMAK+SK   +    KVY F+HNQ+
Sbjct: 196 AIRMAKMSKSSTAGGPHKVYHFVHNQN 222


>ref|XP_002267902.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Vitis
           vinifera]
          Length = 815

 Score = 55.1 bits (131), Expect(2) = 1e-09
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 197 CSKCFKK*IGQGKRTCANCRHPVPPKMASNRSTNSSL 87
           C KCF+K IGQGKRTCANCR+ +P K+AS    NS+L
Sbjct: 176 CLKCFEKWIGQGKRTCANCRNEIPRKVASQPRINSAL 212



 Score = 32.3 bits (72), Expect(2) = 1e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -2

Query: 81  AVRMAKLSKGDCSKVQ*KVYQFIHNQD 1
           A+RMAK+SK   S    KVY F+HNQ+
Sbjct: 215 AIRMAKMSKSVTSVGTSKVYHFVHNQN 241


>emb|CBI29262.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score = 55.1 bits (131), Expect(2) = 1e-09
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 197 CSKCFKK*IGQGKRTCANCRHPVPPKMASNRSTNSSL 87
           C KCF+K IGQGKRTCANCR+ +P K+AS    NS+L
Sbjct: 164 CLKCFEKWIGQGKRTCANCRNEIPRKVASQPRINSAL 200



 Score = 32.3 bits (72), Expect(2) = 1e-09
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -2

Query: 81  AVRMAKLSKGDCSKVQ*KVYQFIHNQD 1
           A+RMAK+SK   S    KVY F+HNQ+
Sbjct: 203 AIRMAKMSKSVTSVGTSKVYHFVHNQN 229


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score = 51.6 bits (122), Expect(2) = 3e-09
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -3

Query: 197 CSKCFKK*IGQGKRTCANCRHPVPPKMASNRSTNSSL 87
           C KCF+K IGQGK TCA CR  +P KMAS    NS+L
Sbjct: 183 CLKCFQKWIGQGKNTCAKCRSVIPSKMASQPRINSTL 219



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 84  TAVRMAKLSKGDCSKVQ*KVYQFIHNQD 1
           T +RMAKLSK   S    KVY F+HNQ+
Sbjct: 221 TVIRMAKLSKSFASGGSQKVYHFVHNQN 248


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score = 51.6 bits (122), Expect(2) = 3e-09
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -3

Query: 197 CSKCFKK*IGQGKRTCANCRHPVPPKMASNRSTNSSL 87
           C KCF+K IGQGK TCA CR  +P KMAS    NS+L
Sbjct: 183 CLKCFQKWIGQGKNTCAKCRSVIPSKMASQPRINSTL 219



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 84  TAVRMAKLSKGDCSKVQ*KVYQFIHNQD 1
           T +RMAKLSK   S    KVY F+HNQ+
Sbjct: 221 TVIRMAKLSKSFASGGSQKVYHFVHNQN 248


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