BLASTX nr result

ID: Cnidium21_contig00042573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042573
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, p...   185   3e-45
ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehyd...   179   2e-43
emb|CBI29382.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_003593285.1| Methylmalonate-semialdehyde dehydrogenase [M...   172   2e-41
gb|ABK95002.1| unknown [Populus trichocarpa]                          172   2e-41

>ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
           communis] gi|223542562|gb|EEF44102.1|
           methylmalonate-semialdehyde dehydrogenase, putative
           [Ricinus communis]
          Length = 709

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/119 (73%), Positives = 104/119 (87%)
 Frame = -1

Query: 359 PSWKRRYPLRVPNFIGGKFVESQSSTSIDVINPATQEVVSQVPVTTHEEFKAAVFAAKRA 180
           PSW++ YP+RVPN IGGKF++SQS  +IDVINPATQ VVSQVP+TT+EEF+AAVFAAKRA
Sbjct: 207 PSWRQHYPMRVPNLIGGKFIDSQSFATIDVINPATQYVVSQVPLTTNEEFRAAVFAAKRA 266

Query: 179 LLSWRNMPLTARQRVMFRFQELIQRDIEKIALSITTEQGKTLKDARDDVLRGLEAVEHA 3
             +WRN P+T RQR+MF+FQELIQRDI+K+A+SITTE GK LKDA  DV RGLE VEHA
Sbjct: 267 FPAWRNTPITTRQRIMFKFQELIQRDIDKLAMSITTEHGKALKDAYGDVSRGLEVVEHA 325


>ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial-like [Vitis vinifera]
          Length = 712

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/119 (73%), Positives = 104/119 (87%)
 Frame = -1

Query: 359 PSWKRRYPLRVPNFIGGKFVESQSSTSIDVINPATQEVVSQVPVTTHEEFKAAVFAAKRA 180
           PSW++R P RVPN IGG+FV+SQS  SIDV NPATQ+VVSQVP+TT+EEF+AA+FAAKRA
Sbjct: 207 PSWRQRNPPRVPNLIGGRFVDSQSFASIDVTNPATQKVVSQVPLTTNEEFRAAIFAAKRA 266

Query: 179 LLSWRNMPLTARQRVMFRFQELIQRDIEKIALSITTEQGKTLKDARDDVLRGLEAVEHA 3
             SWR+ P+T RQR+MF+FQELI+RDI+KIA++ITTE GKTLKDA  DV RGLE VEHA
Sbjct: 267 FPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNITTEHGKTLKDAYTDVHRGLEVVEHA 325


>emb|CBI29382.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/119 (73%), Positives = 104/119 (87%)
 Frame = -1

Query: 359 PSWKRRYPLRVPNFIGGKFVESQSSTSIDVINPATQEVVSQVPVTTHEEFKAAVFAAKRA 180
           PSW++R P RVPN IGG+FV+SQS  SIDV NPATQ+VVSQVP+TT+EEF+AA+FAAKRA
Sbjct: 207 PSWRQRNPPRVPNLIGGRFVDSQSFASIDVTNPATQKVVSQVPLTTNEEFRAAIFAAKRA 266

Query: 179 LLSWRNMPLTARQRVMFRFQELIQRDIEKIALSITTEQGKTLKDARDDVLRGLEAVEHA 3
             SWR+ P+T RQR+MF+FQELI+RDI+KIA++ITTE GKTLKDA  DV RGLE VEHA
Sbjct: 267 FPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNITTEHGKTLKDAYTDVHRGLEVVEHA 325


>ref|XP_003593285.1| Methylmalonate-semialdehyde dehydrogenase [Medicago truncatula]
           gi|355482333|gb|AES63536.1| Methylmalonate-semialdehyde
           dehydrogenase [Medicago truncatula]
          Length = 510

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/112 (75%), Positives = 100/112 (89%)
 Frame = -1

Query: 338 PLRVPNFIGGKFVESQSSTSIDVINPATQEVVSQVPVTTHEEFKAAVFAAKRALLSWRNM 159
           PL+VPN IGGKF+ES+S T IDVINPATQEV+SQVP+TT+EEFKAAV AAK+A  SWRN 
Sbjct: 12  PLKVPNLIGGKFIESKSLTFIDVINPATQEVLSQVPLTTNEEFKAAVAAAKKAFPSWRNT 71

Query: 158 PLTARQRVMFRFQELIQRDIEKIALSITTEQGKTLKDARDDVLRGLEAVEHA 3
           P+T RQRVM +FQELI+RD++K+AL++TTEQGKTLKDA+ DV RGLE VEHA
Sbjct: 72  PITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHA 123


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = -1

Query: 359 PSWKRRYPLRVPNFIGGKFVESQSSTSIDVINPATQEVVSQVPVTTHEEFKAAVFAAKRA 180
           PS   R P RVPN IGGKFV+SQSS++IDVINPATQEVVSQ+P+TT+EEFKAAV AAK A
Sbjct: 37  PSSSLRSPPRVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHA 96

Query: 179 LLSWRNMPLTARQRVMFRFQELIQRDIEKIALSITTEQGKTLKDARDDVLRGLEAVEHA 3
             +WRN P+T RQRVM + QELI+RD +K+A++ITTEQGKTLKDA  DV RGLE VEHA
Sbjct: 97  FPAWRNTPITTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHA 155


Top