BLASTX nr result

ID: Cnidium21_contig00042558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042558
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002529321.1| cellulose synthase, putative [Ricinus commun...   140   8e-32
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    137   7e-31
ref|XP_002280742.2| PREDICTED: cellulose synthase-like protein G...   135   3e-30
emb|CBI23576.3| unnamed protein product [Vitis vinifera]              135   3e-30

>ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/131 (55%), Positives = 82/131 (62%)
 Frame = -2

Query: 395 MSSVPPLHHSTVHKLSAIINISHTFIHSIALTFLIYYRFSSFLYSDHNKTVKPPFLPWLL 216
           M   PPLH   V K S  IN  H  +HSIA+ FLIYYR +SFL+ +       P L WLL
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYR-ASFLFQEPQTKATVPMLLWLL 104

Query: 215 TFXXXXXXXXXXXLYQPYGWRPLSRTTFPENLPEDDKLPGIDVFVCTADPVKEPPLKVMN 36
            F           + Q Y W P+SRT FPE LPEDDKLP IDVF+CT DP KEP L VMN
Sbjct: 105 VFVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMN 164

Query: 35  TVISAMALDYP 3
           TV+SAMALDYP
Sbjct: 165 TVLSAMALDYP 175


>ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis]
           gi|223531245|gb|EEF33090.1| cellulose synthase, putative
           [Ricinus communis]
          Length = 762

 Score =  140 bits (354), Expect = 8e-32
 Identities = 73/131 (55%), Positives = 88/131 (67%)
 Frame = -2

Query: 395 MSSVPPLHHSTVHKLSAIINISHTFIHSIALTFLIYYRFSSFLYSDHNKTVKPPFLPWLL 216
           M +  PLH   VHKL  +IN SH F+H IA++FLI+YR +SFL+ D    V    +PWLL
Sbjct: 1   MDNSLPLHSKNVHKLFILINRSHAFMHCIAISFLIHYR-TSFLFQDPKTVVTS--VPWLL 57

Query: 215 TFXXXXXXXXXXXLYQPYGWRPLSRTTFPENLPEDDKLPGIDVFVCTADPVKEPPLKVMN 36
            F           L   + WRP+SRT FPE LPED KLPG+DVF+CTADP KEP  +VMN
Sbjct: 58  VFFSEILLFFAWLLGLAHRWRPISRTVFPERLPEDRKLPGLDVFICTADPNKEPTSEVMN 117

Query: 35  TVISAMALDYP 3
           TV+SAMALDYP
Sbjct: 118 TVLSAMALDYP 128


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/127 (59%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
 Frame = -2

Query: 380 PLHHSTVHKLSAIINISHTFIHSIALTFLIYYRFSSFLYSDHNKTVKP-PFLPWLLTFXX 204
           PLH  T    SAIIN S++ +H  AL  L YYR SSFL S      KP P LP+LL F  
Sbjct: 5   PLHACTSSISSAIINRSYSLLHFTALVALFYYRLSSFLSS------KPKPSLPYLLVFAS 58

Query: 203 XXXXXXXXXLYQPYGWRPLSRTTFPENLPEDDKLPGIDVFVCTADPVKEPPLKVMNTVIS 24
                      Q Y WRP+SRTTFPE LPED++LPGIDVF+CTAD  KEPPL+VMNTV+S
Sbjct: 59  EMLLSIIWLFDQAYTWRPVSRTTFPERLPEDEELPGIDVFICTADHKKEPPLEVMNTVLS 118

Query: 23  AMALDYP 3
           AMALDYP
Sbjct: 119 AMALDYP 125


>ref|XP_002280742.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 720

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/127 (56%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = -2

Query: 380 PLHHSTVHKLSAIINISHTFIHSIALTFLIYYRFSSF-LYSDHNKTVKPPFLPWLLTFXX 204
           PLH  T+H  + IIN SH F HS+AL  L+YYR SSF LY+    T     L WLL F  
Sbjct: 5   PLHLCTLHTSATIINRSHAFFHSMALLALLYYRASSFYLYA----TAPSHLLTWLLVFAS 60

Query: 203 XXXXXXXXXLYQPYGWRPLSRTTFPENLPEDDKLPGIDVFVCTADPVKEPPLKVMNTVIS 24
                    L Q Y WRP++RT FPE  PED +L  IDVF+CTADP KEPP+KVMNTV+S
Sbjct: 61  ELFLSFLWLLSQAYQWRPVTRTVFPETFPEDRELGAIDVFICTADPKKEPPVKVMNTVLS 120

Query: 23  AMALDYP 3
           AMALDYP
Sbjct: 121 AMALDYP 127


>emb|CBI23576.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/127 (56%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = -2

Query: 380 PLHHSTVHKLSAIINISHTFIHSIALTFLIYYRFSSF-LYSDHNKTVKPPFLPWLLTFXX 204
           PLH  T+H  + IIN SH F HS+AL  L+YYR SSF LY+    T     L WLL F  
Sbjct: 32  PLHLCTLHTSATIINRSHAFFHSMALLALLYYRASSFYLYA----TAPSHLLTWLLVFAS 87

Query: 203 XXXXXXXXXLYQPYGWRPLSRTTFPENLPEDDKLPGIDVFVCTADPVKEPPLKVMNTVIS 24
                    L Q Y WRP++RT FPE  PED +L  IDVF+CTADP KEPP+KVMNTV+S
Sbjct: 88  ELFLSFLWLLSQAYQWRPVTRTVFPETFPEDRELGAIDVFICTADPKKEPPVKVMNTVLS 147

Query: 23  AMALDYP 3
           AMALDYP
Sbjct: 148 AMALDYP 154


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