BLASTX nr result

ID: Cnidium21_contig00042544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042544
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   125   5e-27
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    94   2e-17
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    92   3e-17
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    69   5e-10
ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211...    67   1e-09

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  125 bits (313), Expect = 5e-27
 Identities = 78/165 (47%), Positives = 100/165 (60%), Gaps = 5/165 (3%)
 Frame = -3

Query: 483 KSGSYSVSFKSPSQSGSV--LYNPQQSLTA-IRSWASQAGESQASVSSPKYPHSHNSAKT 313
           +SGS+S+  + P+ + S+  +Y  Q    A  +SWA  +  SQ SV++ K P    S++ 
Sbjct: 339 RSGSFSIYNRGPNSNPSLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPL--SSRG 396

Query: 312 RGEMRRLTEKELQEKRAKGLYFKCDEKWGMGHRCKKR--XXXXXXXXXXXXXXXXXXXXX 139
            GEMRRLTEKELQEKRAKGL FKCDEKWG+GH+C+++                       
Sbjct: 397 FGEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSE 456

Query: 138 SPISPTEEIHTEVPIQPEVFLNSVIGLSNPKTKKLRGIIKGNEVV 4
           +P SPTEE      I PEV LNSVIGLSNPKT KL G+I  +EVV
Sbjct: 457 APPSPTEE------IPPEVSLNSVIGLSNPKTMKLSGLIDNHEVV 495


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
 Frame = -3

Query: 480 SGSYSVSFKSPSQSGSVLYNPQQSLTAIRSWASQAGESQASVSSPKYPHSHNS-AKTRGE 304
           S   + SF  P+Q+ +  YN          + + +  S  S++SP  P +    AK  GE
Sbjct: 283 SAKPTYSFNYPTQTHNTPYN---------QFPAPSHHSSTSINSPNKPKTTLPIAKPFGE 333

Query: 303 MRRLTEKELQEKRAKGLYFKCDEKWGMGHRCKKRXXXXXXXXXXXXXXXXXXXXXSPISP 124
           +RRL+EKELQ KR  GL F+CDEKW +GHRCKK+                        + 
Sbjct: 334 IRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAH 393

Query: 123 TEEIHTEVPIQPEVFLNSVIGLSNPKTKKLRGIIKGNEVV 4
            ++   E+   PE+ LNSV+G+S+PKT K+ G I G +V+
Sbjct: 394 PDDSQLEIH-SPEISLNSVMGISSPKTLKMEGTIYGQKVI 432


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
 Frame = -3

Query: 480 SGSYSVS-FKSPSQSGSVLYNPQQSLTAIRSWASQAGESQASVSSPKYPHSHNS-AKTRG 307
           S +YS +   +P+ S +     Q  L        Q+  S  S+ SP    +H   A+  G
Sbjct: 230 SNNYSPNTHTTPNSSQTFRTQTQTYLPPKHPAPPQSVFSSPSIVSPAKTKTHIPIARPYG 289

Query: 306 EMRRLTEKELQEKRAKGLYFKCDEKWGMGHRCKKR-XXXXXXXXXXXXXXXXXXXXXSPI 130
           E+RRL+EKELQ KR +GL F+CD+KW +GHRCKK                        P 
Sbjct: 290 EIRRLSEKELQHKRERGLCFRCDDKWSVGHRCKKELSVLLSCKEDEEIEYGELENAPQPE 349

Query: 129 SPTEEIHTEVPIQPEVFLNSVIGLSNPKTKKLRGIIKGNEVV 4
            P   I  E  + PE+ LNSV+G SNPKT KLRG I G  V+
Sbjct: 350 IPNTHI-AETFVNPEISLNSVMGFSNPKTLKLRGTIYGEAVI 390


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
 Frame = -3

Query: 318  KTRGEMRRLTEKELQEKRAKGLYFKCDEKWGMGHRCKKRXXXXXXXXXXXXXXXXXXXXX 139
            K  G  +RL + E Q ++ KGL F+C+EK+  GHRCK R                     
Sbjct: 1234 KKEGPTKRLPDAEFQAQKEKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEE 1293

Query: 138  SPISPTE----EIHTEVPIQPEVFLNSVIGLSNPKTKKLRGIIKGNEVV 4
            +    TE    EI+ E     E+ +NSV+GL+NPKT K+RG IK  EV+
Sbjct: 1294 AEWDETELNCVEINPEDQAIVELSINSVVGLTNPKTMKVRGKIKDREVI 1342


>ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
           sativus]
          Length = 674

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
 Frame = -3

Query: 327 NSAKTRGEMRRLTEKELQEKRAKGLYFKCDEKWGMGHRCKKRXXXXXXXXXXXXXXXXXX 148
           N  K     +RL++ E Q KR KGL FKCDEK+  GH+CK +                  
Sbjct: 60  NENKKERPSKRLSDVEFQAKREKGLCFKCDEKYYSGHKCKAKEIRELQMFVIRADNVEEE 119

Query: 147 XXXSPISP-----TEEIHTEVPIQPEVFLNSVIGLSNPKTKKLRGIIKGNEVV 4
                +       T E+ +E+    E+ +NSV+GL+NP   K+RG I+G EV+
Sbjct: 120 IIEEDVYEQRELCTMELKSEIEGVVELCINSVVGLTNPGAMKVRGKIQGREVI 172


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