BLASTX nr result

ID: Cnidium21_contig00042538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042538
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    60   2e-07
ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    59   5e-07
gb|ACU23211.1| unknown [Glycine max]                                   59   5e-07
ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit...    59   5e-07
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial [Vitis vinifera]
           gi|297744229|emb|CBI37199.3| unnamed protein product
           [Vitis vinifera]
          Length = 399

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   YNPRDEDLIKAVTTKINIVINL-GKDYVTKNYSLEEANQRMAERLTI 138
           YNPRDE+ IKAV  K N+V+NL G++Y T+NYS EE N  MAE+L +
Sbjct: 120 YNPRDENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAM 166


>ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial-like [Glycine max]
          Length = 396

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   YNPRDEDLIKAVTTKINIVINL-GKDYVTKNYSLEEANQRMAERL 132
           YNPRDE  +KAV  K N+VINL G+DY T+NYS EE +  MAE+L
Sbjct: 117 YNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQL 161


>gb|ACU23211.1| unknown [Glycine max]
          Length = 396

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   YNPRDEDLIKAVTTKINIVINL-GKDYVTKNYSLEEANQRMAERL 132
           YNPRDE  +KAV  K N+VINL G+DY T+NYS EE +  MAE+L
Sbjct: 117 YNPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQL 161


>ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
           communis] gi|223534095|gb|EEF35812.1| NADH-ubiquinone
           oxidoreductase 39 kD subunit, putative [Ricinus
           communis]
          Length = 394

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   YNPRDEDLIKAVTTKINIVINL-GKDYVTKNYSLEEANQRMAERLTI 138
           YNPRDE  IKAV  K N+VINL G++Y T+NYS EE N  MAE+L +
Sbjct: 121 YNPRDEASIKAVMAKANVVINLIGREYETRNYSFEEVNHGMAEQLAM 167


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   YNPRDEDLIKAVTTKINIVINL-GKDYVTKNYSLEEANQRMAERLTI 138
           YNPRDE+ IKAV  K N+VINL G+DY T+NYS EE N  MA +L +
Sbjct: 115 YNPRDENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAM 161


Top