BLASTX nr result

ID: Cnidium21_contig00042533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042533
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]   104   7e-33
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...    78   4e-30
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]        79   4e-27
emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]    74   4e-25
emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]    92   5e-25

>emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]
          Length = 1721

 Score =  104 bits (259), Expect(2) = 7e-33
 Identities = 44/75 (58%), Positives = 60/75 (80%)
 Frame = +2

Query: 2   FIDDHNRLCWVYLMNEKSDFAKLFKDFYMMIETRFQRKIGILHTNNGTEYFNNFLGNFLK 181
           FIDDH RLCWVYL+ +K++   +F +F+ MI+T+FQ KI IL T+NGTEYFN+ L  +L+
Sbjct: 370 FIDDHTRLCWVYLLTDKTEVRSVFLNFHSMIQTQFQTKIQILRTDNGTEYFNHSLSTYLE 429

Query: 182 EKGIVHQSTCVDNPQ 226
           E GI+HQS+CV+ PQ
Sbjct: 430 ENGIIHQSSCVNTPQ 444



 Score = 61.2 bits (147), Expect(2) = 7e-33
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
 Frame = +3

Query: 213 LTTPKQNGIAERKNRHLLRVARSLLYSMHVPKYLWG----MLFLRLLIYLINRMPTRVLN 380
           + TP+QNG+AERKNRH+L VAR+LL++ H+P   WG       +R L+++ + +    L 
Sbjct: 440 VNTPQQNGVAERKNRHILEVARALLFTSHMPSQFWGDSKSFFLIRDLVHIFHFVSLGPLC 499

Query: 381 YSTPL 395
            STPL
Sbjct: 500 LSTPL 504


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score = 78.2 bits (191), Expect(2) = 4e-30
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +2

Query: 2    FIDDHNRLCWVYLMNEKSDFAKLFKDFYMMIETRFQRKIGILHTNNGTEYFNNFLGNFLK 181
            F+DDH+RL W+YLM  +S+    F  F+  I+ +F   I  L T+N  EYF++ LG++L 
Sbjct: 1093 FVDDHSRLTWLYLMKNRSELLSHFCAFHTEIKNQFNVSIKTLRTDNAGEYFSHSLGSYLC 1152

Query: 182  EKGIVHQSTCVDNP 223
            E GI+HQS+C D P
Sbjct: 1153 ENGIIHQSSCADTP 1166



 Score = 78.2 bits (191), Expect(2) = 4e-30
 Identities = 42/86 (48%), Positives = 54/86 (62%)
 Frame = +3

Query: 219  TPKQNGIAERKNRHLLRVARSLLYSMHVPKYLWGMLFLRLLIYLINRMPTRVLNYSTPLE 398
            TP QNG+AERKNRHLL  A +L + MHV K  W +  +    +LINRMP+ VLN   P  
Sbjct: 1165 TPSQNGVAERKNRHLLETAHALSFQMHVSKIFW-VDAVSTACFLINRMPSSVLNGEIP-- 1221

Query: 399  FFQKEFPFSHMYSNLPLKIFGCIVFV 476
             ++  FP  H++   P KIFGC+ FV
Sbjct: 1222 -YRVLFPTKHLFPIAP-KIFGCVCFV 1245


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score = 79.0 bits (193), Expect(2) = 4e-27
 Identities = 34/75 (45%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   FIDDHNRLCWVYLMNEKSDFAKLFKDFYMMIETRFQRKIGILHTNNGTEYFNNFLGNFLK 181
           FID H+R  W+YL+  K +   +FK+F+ ++  +F +KI IL T+NGT+Y   F  ++LK
Sbjct: 496 FIDHHSRSTWIYLLKHKHEVFSVFKEFHNLVRNQFDKKIKILRTDNGTKYMGGF-KDYLK 554

Query: 182 EKGIVHQSTCVDNPQ 226
           + GI+HQ+TCV  PQ
Sbjct: 555 KFGIIHQTTCVYTPQ 569



 Score = 67.4 bits (163), Expect(2) = 4e-27
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +3

Query: 219 TPKQNGIAERKNRHLLRVARSLLYSMHVPKYLWGMLFLRLLIYLINRMPTRVLNYSTPLE 398
           TP+QNG+AERKNRHLL VAR++++ M+V K  W    L    +LINR+P+   +   P+E
Sbjct: 567 TPQQNGVAERKNRHLLNVARAMMFKMNVKKRFWSDAVL-TACHLINRIPSATTSGLAPIE 625

Query: 399 FFQKEFP-FSHMYSNLPLKIFGCIVFV 476
               + P  S+      L++FGC  FV
Sbjct: 626 ILLNKKPDLSY------LRVFGCCCFV 646


>emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]
          Length = 1285

 Score = 73.6 bits (179), Expect(2) = 4e-25
 Identities = 34/63 (53%), Positives = 45/63 (71%)
 Frame = +2

Query: 38  LMNEKSDFAKLFKDFYMMIETRFQRKIGILHTNNGTEYFNNFLGNFLKEKGIVHQSTCVD 217
           LM EKS+  ++FK F  MI+T+FQ KI IL  +N  EYFN+ L ++L   GIVHQS+CV+
Sbjct: 472 LMKEKSEANQIFKTFNTMIQTQFQAKIQILKXDNAKEYFNSILNBYLXSHGIVHQSSCVN 531

Query: 218 NPQ 226
            PQ
Sbjct: 532 TPQ 534



 Score = 66.2 bits (160), Expect(2) = 4e-25
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = +3

Query: 213 LTTPKQNGIAERKNRHLLRVARSLLYSMHVPKYLWGMLFLRLLIYLINRMPTRVLNYSTP 392
           + TP+QNGIAERKNRHLL VARSL++                    +  M +R+L++ TP
Sbjct: 530 VNTPQQNGIAERKNRHLLDVARSLMF--------------------LPMMSSRILDFQTP 569

Query: 393 LEFFQKEFPFSHMYSNLPLKIFGCIVFV 476
            +   + FP + + S +P K+F C  FV
Sbjct: 570 CQILLQSFPNTRLISTIPFKVFXCSXFV 597


>emb|CAN83808.1| hypothetical protein VITISV_026963 [Vitis vinifera]
          Length = 971

 Score = 92.0 bits (227), Expect(2) = 5e-25
 Identities = 42/84 (50%), Positives = 59/84 (70%)
 Frame = +3

Query: 225 KQNGIAERKNRHLLRVARSLLYSMHVPKYLWGMLFLRLLIYLINRMPTRVLNYSTPLEFF 404
           +QN +AERKNRHL+ VARSL+ + +VPK LWG   L    YLINRMP+R+L + TP +  
Sbjct: 492 QQNRVAERKNRHLMEVARSLMIASNVPKQLWGEAVLTTT-YLINRMPSRILQFKTPCQIL 550

Query: 405 QKEFPFSHMYSNLPLKIFGCIVFV 476
              +P + + S++P+K+FGC  FV
Sbjct: 551 LAAYPSARIISSIPIKVFGCTAFV 574



 Score = 47.4 bits (111), Expect(2) = 5e-25
 Identities = 18/39 (46%), Positives = 30/39 (76%)
 Frame = +2

Query: 2   FIDDHNRLCWVYLMNEKSDFAKLFKDFYMMIETRFQRKI 118
           F+DDH R+ WV LM +KS+  ++F++F  +++T+FQ KI
Sbjct: 453 FVDDHTRVTWVLLMKKKSEVREIFENFNNIVQTQFQAKI 491


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