BLASTX nr result

ID: Cnidium21_contig00042529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042529
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15409.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   127   1e-27
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   127   1e-27
emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]   127   1e-27
ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23

>emb|CBI15409.3| unnamed protein product [Vitis vinifera]
          Length = 1245

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = +2

Query: 137 VVRHQKLCLSIDMDKRRIYGYTELEVTVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 316
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 317 YLHLDSESRWCSVSSVTSAA 376
           + H +SE RW SV S +SAA
Sbjct: 83  HQHTESEKRWSSVLSASSAA 102


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = +2

Query: 137 VVRHQKLCLSIDMDKRRIYGYTELEVTVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 316
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 317 YLHLDSESRWCSVSSVTSAA 376
           + H +SE RW SV S +SAA
Sbjct: 83  HQHTESEKRWSSVLSASSAA 102


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = +2

Query: 137 VVRHQKLCLSIDMDKRRIYGYTELEVTVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 316
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 317 YLHLDSESRWCSVSSVTSAA 376
           + H +SE RW SV S +SAA
Sbjct: 83  HQHTESEKRWSSVLSASSAA 102


>emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]
          Length = 257

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = +2

Query: 137 VVRHQKLCLSIDMDKRRIYGYTELEVTVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 316
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 317 YLHLDSESRWCSVSSVTSAA 376
           + H +SE RW SV S +SAA
Sbjct: 83  HQHTESEKRWSSVLSASSAA 102


>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
           predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = +2

Query: 137 VVRHQKLCLSIDMDKRRIYGYTELEVTVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 316
           VVRHQKLCLSID+DK +IYGYTELE+ VPD GIVGLHA+NL IE+V VDGE  E+E +PH
Sbjct: 20  VVRHQKLCLSIDIDKHQIYGYTELEIAVPDIGIVGLHAENLGIESVFVDGEATEYEYYPH 79

Query: 317 -YLHLDSESRWCSVSSVTSAA 376
              ++D E RW SV+S +SAA
Sbjct: 80  QQQNVDGEKRWSSVTSPSSAA 100


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