BLASTX nr result

ID: Cnidium21_contig00042473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042473
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    65   4e-09
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               64   2e-08
gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]                60   1e-07
ref|NP_001185242.1| FBD, F-box and leucine rich repeat domain-co...    60   1e-07
ref|NP_175962.1| FBD, F-box and leucine rich repeat domain-conta...    60   1e-07

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
 Frame = -1

Query: 308 LNCVGNYDMGRVDMWIDSV-------VRHNVKEINLSFKFKELYELGRVVYVCSSVEILR 150
           ++C+  + +G  D  +DSV       +   V+E++L        EL  + ++C ++ +++
Sbjct: 88  VSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVK 147

Query: 149 LNCKIFVHVPENVGFSRLKVLEFICVKFSSFESVEKLLVNCPLLEDLVI 3
           L+C +F+ +P  V    LK L    V++S  +S++KLL  CP+LE+LVI
Sbjct: 148 LSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVI 196


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
 Frame = -1

Query: 266 WIDSVVRHN----VKEINLSFKFKEL----YELGRVVYVCSSVEILRLNCKIFVHVPENV 111
           ++D V+RH+    +K+  L ++   L     EL  + ++C ++ +++L+C +F+ +P  V
Sbjct: 78  FVDGVLRHSEVSCIKKFRLGYRDNNLDNWGVELPPMFFICKTLVVVKLSCALFLDIPTTV 137

Query: 110 GFSRLKVLEFICVKFSSFESVEKLLVNCPLLEDLVI 3
               LK L    V++S  +S++KLL  CP+LE+LVI
Sbjct: 138 WLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVI 173


>gb|AAF79496.1|AC002328_4 F20N2.9 [Arabidopsis thaliana]
          Length = 526

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -1

Query: 317 RFSLNCVGNYDMGRVDMWIDSVVR-HNVKEINLS-FKFKEL-YELGRVVYVCSSVEILRL 147
           +F    +G+     + +W+   V   NV+E++L  F F EL  +L + +  C S+ IL+L
Sbjct: 166 KFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKL 225

Query: 146 NCKIFVHVPENVGFSRLKVLEFICVKFSSFESVEKLLVNCPLLEDLVI 3
             +I V VP  V    LK L    V +S   S+ +LL NCP+LEDLV+
Sbjct: 226 KDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVM 273


>ref|NP_001185242.1| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
           gi|122180328|sp|Q1PFK0.1|FBL32_ARATH RecName:
           Full=F-box/LRR-repeat protein At1g55660
           gi|91805971|gb|ABE65714.1| F-box family protein
           [Arabidopsis thaliana] gi|332195159|gb|AEE33280.1| FBD,
           F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 364

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -1

Query: 317 RFSLNCVGNYDMGRVDMWIDSVVR-HNVKEINLS-FKFKEL-YELGRVVYVCSSVEILRL 147
           +F    +G+     + +W+   V   NV+E++L  F F EL  +L + +  C S+ IL+L
Sbjct: 132 KFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKL 191

Query: 146 NCKIFVHVPENVGFSRLKVLEFICVKFSSFESVEKLLVNCPLLEDLVI 3
             +I V VP  V    LK L    V +S   S+ +LL NCP+LEDLV+
Sbjct: 192 KDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVM 239


>ref|NP_175962.1| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana] gi|332195158|gb|AEE33279.1| FBD,
           F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 492

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -1

Query: 317 RFSLNCVGNYDMGRVDMWIDSVVR-HNVKEINLS-FKFKEL-YELGRVVYVCSSVEILRL 147
           +F    +G+     + +W+   V   NV+E++L  F F EL  +L + +  C S+ IL+L
Sbjct: 132 KFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKL 191

Query: 146 NCKIFVHVPENVGFSRLKVLEFICVKFSSFESVEKLLVNCPLLEDLVI 3
             +I V VP  V    LK L    V +S   S+ +LL NCP+LEDLV+
Sbjct: 192 KDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVM 239


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