BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042470
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    70   2e-10
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis...    59   5e-07
ref|XP_002526719.1| DNA-damage-inducible protein f, putative [Ri...    57   2e-06

>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 58/175 (33%)
 Frame = +3

Query: 15  MTESDIKQNFRNVCTRLLYITRFCSLSKDIQLHVQIIKSGF*T----------------- 143
           + ++  +QN+R +C  LL  TR  SL + +QLH  I+K G  T                 
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75

Query: 144 --------------------ELVSSFAQNDLPVLL--FFDK------------------- 200
                                ++S+FAQN+ P+L   FF +                   
Sbjct: 76  PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135

Query: 201 CSILDVDFGRVDVVGSVHWVVLRTGFVWDVLVGSFVVDMYAKYRDLRDARKMFDE 365
           C  L     R DV  SVH + ++TG+  DV VGS +VDMYAK  ++ DAR +FDE
Sbjct: 136 CGFLR----RSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDE 186


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 58/175 (33%)
 Frame = +3

Query: 15  MTESDIKQNFRNVCTRLLYITRFCSLSKDIQLHVQIIKSGF*T----------------- 143
           + ++  +QN+R +C  LL  TR  SL + +QLH  I+K G  T                 
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75

Query: 144 --------------------ELVSSFAQNDLPVLL--FFDK------------------- 200
                                ++S+FAQN+ P+L   FF +                   
Sbjct: 76  PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135

Query: 201 CSILDVDFGRVDVVGSVHWVVLRTGFVWDVLVGSFVVDMYAKYRDLRDARKMFDE 365
           C  L     R DV  SVH + ++TG+  DV VGS +VDMYAK  ++ DAR +FDE
Sbjct: 136 CGFLR----RSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDE 186


>ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|222867333|gb|EEF04464.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 54/165 (32%)
 Frame = +3

Query: 33  KQNFRNVCTRLLYITRFCSLSKDIQLHVQIIKSGF*------------------------ 140
           ++ + ++C  LL  TR  SL K  Q+H  IIKSG                          
Sbjct: 51  EKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQ 110

Query: 141 -------------TELVSSFAQNDLPVLLFFDKCSILDVDF-----------------GR 230
                        + ++SSFAQN+ PVL     C ++  +                  GR
Sbjct: 111 VFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGR 170

Query: 231 VDVVGSVHWVVLRTGFVWDVLVGSFVVDMYAKYRDLRDARKMFDE 365
            DV  SVH +V++TG+  DV VGS +VDMYAK  D+++AR +FDE
Sbjct: 171 CDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDE 215


>ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
           gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g52630 gi|8953718|dbj|BAA98081.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332008860|gb|AED96243.1| mitochondrial RNA editing
           factor 1 [Arabidopsis thaliana]
          Length = 588

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 51/167 (30%), Positives = 69/167 (41%), Gaps = 58/167 (34%)
 Frame = +3

Query: 39  NFRNVCTRLLYITRFCSLSKDIQLHVQIIKSGF*-------------------------- 140
           N+  +C  LL   R  S  K +QLH  ++KSG                            
Sbjct: 14  NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73

Query: 141 -----------TELVSSFAQNDLP--VLLFFDK-------------------CSILDVDF 224
                      + ++S FAQN+LP   L F  K                   C+IL    
Sbjct: 74  EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILS--- 130

Query: 225 GRVDVVGSVHWVVLRTGFVWDVLVGSFVVDMYAKYRDLRDARKMFDE 365
            R D+  SVH + ++TG+  DV VGS +VDMYAK  ++  ARKMFDE
Sbjct: 131 -RCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDE 176


>ref|XP_002526719.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223533908|gb|EEF35633.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 906

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +3

Query: 222 FGRVDVVGSVHWVVLRTGFVWDVLVGSFVVDMYAKYRDLRDARKMFDE 365
           +GR DV  SVH  V++TG+ ++V VGS  VDMYAK  +L DARK+FDE
Sbjct: 23  WGRCDVGKSVHGFVIKTGYNFNVFVGSSTVDMYAKCGELSDARKVFDE 70