BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042430
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               232   1e-58
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  223   7e-56
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   223   7e-56
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   219   9e-55
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                218   2e-54

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  232 bits (591), Expect = 1e-58
 Identities = 105/169 (62%), Positives = 137/169 (81%)
 Frame = +3

Query: 426  VKKSNGKWRICVDYSDLNRACPKDFYPLPNIDQLIDATAGHEILSFMDAFSGYNQIKMDN 605
            VKK+NGKWR+CVDY+DLN+ACPKD YPLP ID+L+D  AGH+ILSF+DA+SGYNQI+M +
Sbjct: 945  VKKTNGKWRMCVDYTDLNKACPKDSYPLPTIDRLVDGAAGHQILSFLDAYSGYNQIQMYH 1004

Query: 606  QDWKQTAFITHQGYSAFKVMPFGLISIGATFQEMMDTVFRSQIGRNMQVYVDDMIVKTKQ 785
            +D ++TAF T      ++VMPFGL + GAT+Q +MD VF   IGRN++VYVDD++VK+  
Sbjct: 1005 RDREKTAFRTDSDNFFYEVMPFGLKNAGATYQRLMDHVFHDMIGRNVEVYVDDIVVKSDS 1064

Query: 786  VVDHASDLRETFENIRRHKMRLNPAKCSFGVTAGKFLGFLLTQRGIEAN 932
               H SDL+E F+ +R+++MRLNP KC+FGV  GKFLGF+LT RGIEAN
Sbjct: 1065 CEQHVSDLKEVFQALRQYRMRLNPEKCAFGVEGGKFLGFMLTHRGIEAN 1113


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score =  223 bits (567), Expect = 7e-56
 Identities = 100/169 (59%), Positives = 133/169 (78%)
 Frame = +3

Query: 426  VKKSNGKWRICVDYSDLNRACPKDFYPLPNIDQLIDATAGHEILSFMDAFSGYNQIKMDN 605
            V+K+NGKWR+C+D++DLN+ACPKD +PLP IDQL+D+T+G E+LSF+DA+SGY+QI M  
Sbjct: 1115 VRKNNGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDSTSGCELLSFLDAYSGYHQISMCK 1174

Query: 606  QDWKQTAFITHQGYSAFKVMPFGLISIGATFQEMMDTVFRSQIGRNMQVYVDDMIVKTKQ 785
            +D ++T+FIT  G   +  MPFGL + GATFQ +M   F  QIGRN++ YVDD++VK   
Sbjct: 1175 EDEEKTSFITPYGTYCYIKMPFGLKNAGATFQRLMQKTFSPQIGRNLEAYVDDLVVKNTN 1234

Query: 786  VVDHASDLRETFENIRRHKMRLNPAKCSFGVTAGKFLGFLLTQRGIEAN 932
              DH  DL+ETF N+RRH ++LNP KC FGV+AGK LGFL++ RGIEAN
Sbjct: 1235 AGDHIPDLQETFNNLRRHNLKLNPEKCVFGVSAGKLLGFLVSARGIEAN 1283


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  223 bits (567), Expect = 7e-56
 Identities = 97/169 (57%), Positives = 139/169 (82%)
 Frame = +3

Query: 426  VKKSNGKWRICVDYSDLNRACPKDFYPLPNIDQLIDATAGHEILSFMDAFSGYNQIKMDN 605
            VKK NGKWR+C+D++DLN+ACPKD +PLP+ID+L++ATAG+E+LSFMDAFSGYNQI M  
Sbjct: 826  VKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQ 885

Query: 606  QDWKQTAFITHQGYSAFKVMPFGLISIGATFQEMMDTVFRSQIGRNMQVYVDDMIVKTKQ 785
             D ++T FIT QG   +KVMPFGL + GAT+  +++ +F  Q+  +M+VY+DDM+VK+ +
Sbjct: 886  NDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLR 945

Query: 786  VVDHASDLRETFENIRRHKMRLNPAKCSFGVTAGKFLGFLLTQRGIEAN 932
              +H + LR+ F+ + R+ M+LNP+KC+FGVT+G+FLG+L+T+RGIEAN
Sbjct: 946  AEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRGIEAN 994


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  219 bits (557), Expect = 9e-55
 Identities = 93/169 (55%), Positives = 136/169 (80%)
 Frame = +3

Query: 426  VKKSNGKWRICVDYSDLNRACPKDFYPLPNIDQLIDATAGHEILSFMDAFSGYNQIKMDN 605
            VKK N KWR+C+D++DLN+ACPKD +PLP+ID++++AT G+E+LSFMDAFSGYNQI M  
Sbjct: 541  VKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQIPMHK 600

Query: 606  QDWKQTAFITHQGYSAFKVMPFGLISIGATFQEMMDTVFRSQIGRNMQVYVDDMIVKTKQ 785
             D ++T+FI  +G   +KVMPFGL ++GA +Q +++ +F  Q+G+ M+VY+DDM+VK+ +
Sbjct: 601  DDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDMLVKSTR 660

Query: 786  VVDHASDLRETFENIRRHKMRLNPAKCSFGVTAGKFLGFLLTQRGIEAN 932
              DH   L+  FE + ++ M+LNPAKC FGVT+G+FLG+++T+RGIEAN
Sbjct: 661  SADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRGIEAN 709


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  218 bits (555), Expect = 2e-54
 Identities = 97/169 (57%), Positives = 131/169 (77%)
 Frame = +3

Query: 426 VKKSNGKWRICVDYSDLNRACPKDFYPLPNIDQLIDATAGHEILSFMDAFSGYNQIKMDN 605
           VKK NGKWR+CVD++DLN+ACPKD +P+P IDQL+DAT  H  +SF+DAF  Y+QI M  
Sbjct: 137 VKKKNGKWRVCVDFTDLNKACPKDPFPIPRIDQLVDATVRHPRMSFLDAFQNYHQIPMSL 196

Query: 606 QDWKQTAFITHQGYSAFKVMPFGLISIGATFQEMMDTVFRSQIGRNMQVYVDDMIVKTKQ 785
            D ++TAF T  G   ++VMPFGL + G+T+Q M+  +F SQ+GR M+ Y+DDM++K+K+
Sbjct: 197 NDQEKTAFRTPNGNYHYRVMPFGLKNAGSTYQRMVTRMFDSQLGRTMEAYIDDMVIKSKK 256

Query: 786 VVDHASDLRETFENIRRHKMRLNPAKCSFGVTAGKFLGFLLTQRGIEAN 932
           V DH  DL ETF  +R+HK+RLN +KCSFGV +GKFLG+++T RGIE N
Sbjct: 257 VGDHLKDLHETFSVLRKHKLRLNASKCSFGVDSGKFLGYMITHRGIEFN 305