BLASTX nr result

ID: Cnidium21_contig00042424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042424
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16593.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   194   8e-48
ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus ...   179   2e-43

>emb|CBI16593.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  194 bits (492), Expect = 8e-48
 Identities = 89/138 (64%), Positives = 111/138 (80%)
 Frame = +3

Query: 3   VDCSPGSGRDMGVCPALERLHMEKCQLRQKRSVRALFLVCRSARELVFRNCWGLTDDIFG 182
           +D SPGS + +G CP LE LH+++CQ+R K+S RALFLVC + RE+V ++CWGL D+ FG
Sbjct: 192 IDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGLEDETFG 251

Query: 183 TGNICRRVKSLSLEGCSRLTIEGLASVIFYWNELESLTVTSCSNIKDSEVTPELATLFSV 362
              ICRR+KSLSLEGCS LT+EGL SV+  W EL+ L V SC+NIKDSEVTP LATLFSV
Sbjct: 252 IATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPALATLFSV 311

Query: 363 LKKFKWKADTRSLLSASL 416
           LK+ KW+ D+RSLLS+SL
Sbjct: 312 LKELKWRPDSRSLLSSSL 329


>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  194 bits (492), Expect = 8e-48
 Identities = 89/138 (64%), Positives = 111/138 (80%)
 Frame = +3

Query: 3   VDCSPGSGRDMGVCPALERLHMEKCQLRQKRSVRALFLVCRSARELVFRNCWGLTDDIFG 182
           +D SPGS + +G CP LE LH+++CQ+R K+S RALFLVC + RE+V ++CWGL D+ FG
Sbjct: 320 IDASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALFLVCEAVREIVLQDCWGLEDETFG 379

Query: 183 TGNICRRVKSLSLEGCSRLTIEGLASVIFYWNELESLTVTSCSNIKDSEVTPELATLFSV 362
              ICRR+KSLSLEGCS LT+EGL SV+  W EL+ L V SC+NIKDSEVTP LATLFSV
Sbjct: 380 IATICRRLKSLSLEGCSLLTVEGLDSVVHSWKELQRLRVVSCNNIKDSEVTPALATLFSV 439

Query: 363 LKKFKWKADTRSLLSASL 416
           LK+ KW+ D+RSLLS+SL
Sbjct: 440 LKELKWRPDSRSLLSSSL 457


>ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|222835133|gb|EEE73568.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/138 (60%), Positives = 108/138 (78%)
 Frame = +3

Query: 3   VDCSPGSGRDMGVCPALERLHMEKCQLRQKRSVRALFLVCRSARELVFRNCWGLTDDIFG 182
           +D SPG    +G CP LE LH+++CQ+R K++V+ALFL+C++ RE+V +NCWGL D++F 
Sbjct: 258 IDSSPGLPEHLGSCPTLEELHLQQCQMRDKQAVKALFLICKTVREIVLQNCWGLEDEVFA 317

Query: 183 TGNICRRVKSLSLEGCSRLTIEGLASVIFYWNELESLTVTSCSNIKDSEVTPELATLFSV 362
           T  +CRR + LSLEGCS LT   L SVI  W ELE LTV SC+NIKDSE+TP+LATLFSV
Sbjct: 318 TATVCRRARLLSLEGCSLLTTGCLESVILNWKELERLTVISCNNIKDSEITPDLATLFSV 377

Query: 363 LKKFKWKADTRSLLSASL 416
           LK+ KW+ D++SLLSA L
Sbjct: 378 LKELKWRPDSKSLLSAGL 395


>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/138 (60%), Positives = 109/138 (78%)
 Frame = +3

Query: 3   VDCSPGSGRDMGVCPALERLHMEKCQLRQKRSVRALFLVCRSARELVFRNCWGLTDDIFG 182
           VD SPG    +G CP LE LH+++CQ+R K++V+ALFLVC++ RE+V +NCW L D++F 
Sbjct: 295 VDSSPGLLEHLGSCPTLEELHVQRCQMRDKQAVKALFLVCKTVREIVLQNCWRLEDEVFA 354

Query: 183 TGNICRRVKSLSLEGCSRLTIEGLASVIFYWNELESLTVTSCSNIKDSEVTPELATLFSV 362
             ++CRRV+ LSLEGCS LT  GL SVI  W EL+ LTVTS +NIKDSE+TP+LATLFSV
Sbjct: 355 AASVCRRVRLLSLEGCSLLTTGGLESVILNWKELQRLTVTSSNNIKDSEITPDLATLFSV 414

Query: 363 LKKFKWKADTRSLLSASL 416
           LK+ KW+ D+RSLLS+ L
Sbjct: 415 LKELKWRPDSRSLLSSGL 432


>ref|XP_002511646.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223548826|gb|EEF50315.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 459

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/138 (58%), Positives = 106/138 (76%)
 Frame = +3

Query: 3   VDCSPGSGRDMGVCPALERLHMEKCQLRQKRSVRALFLVCRSARELVFRNCWGLTDDIFG 182
           +D SPG    +G CP LE LH+++CQ+R K  V+ALF VC + RE+VF+NCWGL D++F 
Sbjct: 304 IDSSPGPDEHLGSCPTLEELHLQQCQMRDKLGVKALFSVCEAVREIVFQNCWGLEDEVFS 363

Query: 183 TGNICRRVKSLSLEGCSRLTIEGLASVIFYWNELESLTVTSCSNIKDSEVTPELATLFSV 362
           T ++CRRV+ LSLEGCS LT  GL +VI  W EL+ L V SC+ IKD+EV+P LA+LFSV
Sbjct: 364 TASVCRRVRLLSLEGCSSLTTGGLEAVILNWKELQRLRVMSCNKIKDNEVSPALASLFSV 423

Query: 363 LKKFKWKADTRSLLSASL 416
           LK+ KW+ D+RSLLS+SL
Sbjct: 424 LKELKWRPDSRSLLSSSL 441


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