BLASTX nr result
ID: Cnidium21_contig00042422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00042422 (551 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2... 211 6e-53 emb|CBI30660.3| unnamed protein product [Vitis vinifera] 210 1e-52 ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 210 1e-52 emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera] 209 2e-52 ref|XP_003593731.1| Pentatricopeptide repeat-containing protein ... 198 5e-49 >ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1| predicted protein [Populus trichocarpa] Length = 530 Score = 211 bits (537), Expect = 6e-53 Identities = 106/169 (62%), Positives = 132/169 (78%) Frame = +3 Query: 45 YPPVEINYLFNQSNTSTLSTALQHYINSDYPCHGQKVHSHIIKTGFSPNTNISIKLLIVH 224 +PP + +Y+ +Q+ T TLS+ALQHYINSD P HGQK+H+HI+KTGF PN NISIKLLI+H Sbjct: 29 FPPNQEDYITHQTPT-TLSSALQHYINSDTPFHGQKIHTHILKTGFRPNINISIKLLILH 87 Query: 225 LKSSCLLYARKVFDELSHPTLSAYNYMLSGYVKSGKINESFSLVRRLCFSGECPDGFTFS 404 LK CL YA ++FDEL TLSAYNYM+ GY++ G ES S+VRRL GE PDGFTFS Sbjct: 88 LKCRCLKYAHQLFDELPQRTLSAYNYMIGGYLRQGLFEESISMVRRLDLDGERPDGFTFS 147 Query: 405 MILKASTSESVLSMPRSIGSQVHARIVKSDTEVDNVLCTALVYSYVKNG 551 MILKASTS + + +PR+ G VHA+I+K D + D+VL TALV SYVK+G Sbjct: 148 MILKASTSGANVMLPRNTGGLVHAQILKLDVKADDVLYTALVDSYVKSG 196 >emb|CBI30660.3| unnamed protein product [Vitis vinifera] Length = 598 Score = 210 bits (534), Expect = 1e-52 Identities = 109/185 (58%), Positives = 138/185 (74%), Gaps = 2/185 (1%) Frame = +3 Query: 3 STHISQPIFQQNYNYPPVEINYLFNQSNTSTLSTALQHYINSDYPCHGQKVHSHIIKTGF 182 S+ +P N ++PP +Y+ + + S LS ALQHYINSD+P HGQK+HSHI+K GF Sbjct: 16 SSQNQRPSVPPNQSFPPAS-DYISSPTAIS-LSVALQHYINSDFPSHGQKIHSHILKIGF 73 Query: 183 SPNTNISIKLLIVHLKSSCLLYARKVFDELSHPTLSAYNYMLSGYVKSGKINESFSLVRR 362 PNTN+SIKLLI+HLKS CL YAR++FDE+ PTLSAYNYM+SGY+K G+I E +LV R Sbjct: 74 EPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSR 133 Query: 363 LCFSGECPDGFTFSMILKAS--TSESVLSMPRSIGSQVHARIVKSDTEVDNVLCTALVYS 536 L FS E PDGFTFSMILKA+ S + + S+G VHA+I++S+ E D+VL TALV S Sbjct: 134 LTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVVHAQILRSNVESDDVLYTALVDS 193 Query: 537 YVKNG 551 YVKNG Sbjct: 194 YVKNG 198 >ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Vitis vinifera] Length = 533 Score = 210 bits (534), Expect = 1e-52 Identities = 109/185 (58%), Positives = 138/185 (74%), Gaps = 2/185 (1%) Frame = +3 Query: 3 STHISQPIFQQNYNYPPVEINYLFNQSNTSTLSTALQHYINSDYPCHGQKVHSHIIKTGF 182 S+ +P N ++PP +Y+ + + S LS ALQHYINSD+P HGQK+HSHI+K GF Sbjct: 16 SSQNQRPSVPPNQSFPPAS-DYISSPTAIS-LSVALQHYINSDFPSHGQKIHSHILKIGF 73 Query: 183 SPNTNISIKLLIVHLKSSCLLYARKVFDELSHPTLSAYNYMLSGYVKSGKINESFSLVRR 362 PNTN+SIKLLI+HLKS CL YAR++FDE+ PTLSAYNYM+SGY+K G+I E +LV R Sbjct: 74 EPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSR 133 Query: 363 LCFSGECPDGFTFSMILKAS--TSESVLSMPRSIGSQVHARIVKSDTEVDNVLCTALVYS 536 L FS E PDGFTFSMILKA+ S + + S+G VHA+I++S+ E D+VL TALV S Sbjct: 134 LTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVVHAQILRSNVESDDVLYTALVDS 193 Query: 537 YVKNG 551 YVKNG Sbjct: 194 YVKNG 198 >emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera] Length = 504 Score = 209 bits (532), Expect = 2e-52 Identities = 107/185 (57%), Positives = 135/185 (72%), Gaps = 2/185 (1%) Frame = +3 Query: 3 STHISQPIFQQNYNYPPVEINYLFNQSNTSTLSTALQHYINSDYPCHGQKVHSHIIKTGF 182 S+ +P N ++PP + + +LS ALQHYINSD+P HGQK+HSHI+K GF Sbjct: 16 SSXNQRPXVPPNQSFPPA--SDXISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGF 73 Query: 183 SPNTNISIKLLIVHLKSSCLLYARKVFDELSHPTLSAYNYMLSGYVKSGKINESFSLVRR 362 PNTN+SIKLLI+HLKS CL YAR++FDE+ PTLSAYNYM+SGY+K G+I E +LV R Sbjct: 74 EPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSR 133 Query: 363 LCFSGECPDGFTFSMILKAS--TSESVLSMPRSIGSQVHARIVKSDTEVDNVLCTALVYS 536 L FS E PDGFTFSMILKA+ S + + S+G VHA+I++S+ E D+VL TALV S Sbjct: 134 LTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVVHAQILRSNVEXDDVLYTALVDS 193 Query: 537 YVKNG 551 YVKNG Sbjct: 194 YVKNG 198 >ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355482779|gb|AES63982.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 520 Score = 198 bits (503), Expect = 5e-49 Identities = 101/175 (57%), Positives = 126/175 (72%) Frame = +3 Query: 27 FQQNYNYPPVEINYLFNQSNTSTLSTALQHYINSDYPCHGQKVHSHIIKTGFSPNTNISI 206 F QN+++ P ++ S LQHYINS P HGQK+HSHI+KTGF PNTNISI Sbjct: 27 FSQNHDFIPP----------STFFSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISI 76 Query: 207 KLLIVHLKSSCLLYARKVFDELSHPTLSAYNYMLSGYVKSGKINESFSLVRRLCFSGECP 386 KLLI+++KS L YAR+VFD+L TLSAYNYM+ GY+K+G+++ES L +L SGE P Sbjct: 77 KLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKP 136 Query: 387 DGFTFSMILKASTSESVLSMPRSIGSQVHARIVKSDTEVDNVLCTALVYSYVKNG 551 DGFTFSMILKAST+ M +G VHA+I+K D E D+VLCTAL+ SYVKNG Sbjct: 137 DGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNG 191