BLASTX nr result

ID: Cnidium21_contig00042419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042419
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278453.1| PREDICTED: uncharacterized mscS family prote...   160   1e-37
emb|CAN67321.1| hypothetical protein VITISV_039348 [Vitis vinifera]   160   1e-37
ref|XP_002280985.2| PREDICTED: uncharacterized mscS family prote...   154   9e-36
ref|XP_002524547.1| conserved hypothetical protein [Ricinus comm...   151   5e-35
ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002278453.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
           [Vitis vinifera]
          Length = 897

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/116 (66%), Positives = 97/116 (83%)
 Frame = +3

Query: 3   MIRSGVVGLGSELDEDDPFSEDDLPEEYKNMKFSKWSLVQFLSLILIFAVLVCSVSIDFF 182
           M++SG++G  SE DE+DPF  DDLPEE+K   FS W+++Q+L LIL+ AVLVCS++I  F
Sbjct: 253 MLKSGLLGK-SEEDEEDPFFVDDLPEEFKRSNFSFWTILQWLILILLVAVLVCSLTIPLF 311

Query: 183 KKRDLFGFALWKWCLMILVLICGRLVSGWGIRVVVFFVERNFMLRKRVLYFVYGLR 350
           K R L+   LW+W +M+LVLICGRLVSGWGIR+VVFF+ERNF+LRKRVLYFVYGLR
Sbjct: 312 KDRILWKLRLWRWEVMVLVLICGRLVSGWGIRLVVFFIERNFLLRKRVLYFVYGLR 367


>emb|CAN67321.1| hypothetical protein VITISV_039348 [Vitis vinifera]
          Length = 922

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/116 (66%), Positives = 97/116 (83%)
 Frame = +3

Query: 3   MIRSGVVGLGSELDEDDPFSEDDLPEEYKNMKFSKWSLVQFLSLILIFAVLVCSVSIDFF 182
           M++SG++G  SE DE+DPF  DDLPEE+K   FS W+++Q+L LIL+ AVLVCS++I  F
Sbjct: 283 MLKSGLLGK-SEEDEEDPFFVDDLPEEFKRSNFSFWTILQWLILILLVAVLVCSLTIPLF 341

Query: 183 KKRDLFGFALWKWCLMILVLICGRLVSGWGIRVVVFFVERNFMLRKRVLYFVYGLR 350
           K R L+   LW+W +M+LVLICGRLVSGWGIR+VVFF+ERNF+LRKRVLYFVYGLR
Sbjct: 342 KDRILWKLRLWRWEVMVLVLICGRLVSGWGIRLVVFFIERNFLLRKRVLYFVYGLR 397


>ref|XP_002280985.2| PREDICTED: uncharacterized mscS family protein At1g78610-like [Vitis
            vinifera]
          Length = 1515

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/116 (62%), Positives = 96/116 (82%)
 Frame = +3

Query: 3    MIRSGVVGLGSELDEDDPFSEDDLPEEYKNMKFSKWSLVQFLSLILIFAVLVCSVSIDFF 182
            + +SG++G+ SE +E+DPF  DDLPEE+K   FS W+++Q+L LIL+  +LVCS++I  F
Sbjct: 870  VFKSGLLGI-SEEEEEDPFVVDDLPEEFKGSNFSVWTILQWLILILLVVLLVCSLTIHPF 928

Query: 183  KKRDLFGFALWKWCLMILVLICGRLVSGWGIRVVVFFVERNFMLRKRVLYFVYGLR 350
            K R ++   LWKW +M+LVLICGRLVSGWGIR+VVFF+ERNF+LRKRVLYFVYGLR
Sbjct: 929  KGRIVWKLRLWKWEVMVLVLICGRLVSGWGIRLVVFFIERNFLLRKRVLYFVYGLR 984


>ref|XP_002524547.1| conserved hypothetical protein [Ricinus communis]
           gi|223536221|gb|EEF37874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 709

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/117 (60%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
 Frame = +3

Query: 6   IRSGVVGLGSELD--EDDPFSEDDLPEEYKNMKFSKWSLVQFLSLILIFAVLVCSVSIDF 179
           +RSG VG GS +D  EDDP  E+DLPEE+K  K   W L+Q++SLILI A LVCS+   +
Sbjct: 145 LRSGFVGKGSVIDDEEDDPLLEEDLPEEFKKDKLDIWVLLQWVSLILIIAALVCSLVSSY 204

Query: 180 FKKRDLFGFALWKWCLMILVLICGRLVSGWGIRVVVFFVERNFMLRKRVLYFVYGLR 350
           F+ + L+  +LWKW + +LVLICGRLVSGW IR++VFF+ERNF+LRKRVLYFVYG++
Sbjct: 205 FRNKSLWRLSLWKWEVFVLVLICGRLVSGWVIRIIVFFIERNFLLRKRVLYFVYGIK 261


>ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|222860505|gb|EEE98052.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/118 (58%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
 Frame = +3

Query: 3   MIRSGVVGLGSELDE--DDPFSEDDLPEEYKNMKFSKWSLVQFLSLILIFAVLVCSVSID 176
           +++SG +G GS +DE  DDP  E+DLPEEYK  +   W L+++LSLI+I A LVCS++I 
Sbjct: 42  LLKSGFLGKGSVVDEEEDDPLLEEDLPEEYKKDRLDIWILLEWLSLIIIIAALVCSLAIP 101

Query: 177 FFKKRDLFGFALWKWCLMILVLICGRLVSGWGIRVVVFFVERNFMLRKRVLYFVYGLR 350
           + + ++L+   LWKW +++LVLICGRLVSGW I+V+VFF+ERNF+LRKRVLYFVYG+R
Sbjct: 102 YLRTKNLWRLRLWKWEVLVLVLICGRLVSGWVIKVIVFFIERNFLLRKRVLYFVYGIR 159


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