BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00042412
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   110   4e-26
emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera]    97   9e-23
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]    95   9e-23
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   100   2e-22
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    94   2e-22

>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  110 bits (275), Expect(2) = 4e-26
 Identities = 49/102 (48%), Positives = 70/102 (68%)
 Frame = +3

Query: 9   GFTYTVADYLLFVYKSEDIFVTALVYVDDILLTGTSTEFMTRVKSELHSAFTIKDLGLAK 188
           GFT ++ DY LF Y  + +F+  LVYVDD+++TGTS   +  VKS +H  F IKDLG  +
Sbjct: 55  GFTSSLNDYSLFTYNKDGVFLALLVYVDDVIITGTSHSLIQSVKSYIHDLFRIKDLGQLR 114

Query: 189 YYLGLELHKTDEGLYIHQHKFVYDLLVEAGLDNCKPLSLPVD 314
           Y+LG E  ++D GL+++Q K+  DL+ EAGL  CKP  +P+D
Sbjct: 115 YFLGFEAARSDAGLFLNQRKYALDLISEAGLLGCKPSKIPMD 156



 Score = 32.3 bits (72), Expect(2) = 4e-26
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +2

Query: 323 QLSPTDGVLLDDPSIYRKFVGKLLYLT 403
           +LS +   LL+DP+ YR+ VG+L+YLT
Sbjct: 160 KLSLSTSPLLEDPAPYRRLVGQLIYLT 186


>emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera]
          Length = 1159

 Score = 97.1 bits (240), Expect(2) = 9e-23
 Identities = 44/111 (39%), Positives = 70/111 (63%)
 Frame = +3

Query: 3    AIGFTYTVADYLLFVYKSEDIFVTALVYVDDILLTGTSTEFMTRVKSELHSAFTIKDLGL 182
            +  FT    DY LF + S    V  LVYVDDI++TGT    +T+++  LH+ F +KDL  
Sbjct: 932  SFSFTQIQYDYSLFFHTSVSSIVLLLVYVDDIIITGTBCSXITKLQQLLHATFHMKDLXQ 991

Query: 183  AKYYLGLELHKTDEGLYIHQHKFVYDLLVEAGLDNCKPLSLPVDINVNYRQ 335
              Y+LGLE+H    G++++QHK++ DL+  AGL++   +  P+++NV  R+
Sbjct: 992  LTYFLGLEVHXRASGIFVNQHKYIQDLITLAGLEDTSSVDTPMEVNVKCRK 1042



 Score = 34.7 bits (78), Expect(2) = 9e-23
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +2

Query: 338  DGVLLDDPSIYRKFVGKLLYLTVS 409
            +G LLDDP++YR  VG L+YLT +
Sbjct: 1044 EGDLLDDPTLYRLLVGSLIYLTTT 1067


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score = 94.7 bits (234), Expect(2) = 9e-23
 Identities = 44/104 (42%), Positives = 67/104 (64%)
 Frame = +3

Query: 9    GFTYTVADYLLFVYKSEDIFVTALVYVDDILLTGTSTEFMTRVKSELHSAFTIKDLGLAK 188
            GF  ++ADY LF   S + F+  L+YVDD+++TG     +  +K  LH+ F IKDLG  +
Sbjct: 789  GFHQSMADYSLFTKISGNSFIVVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLR 848

Query: 189  YYLGLELHKTDEGLYIHQHKFVYDLLVEAGLDNCKPLSLPVDIN 320
            Y+LG+E+ ++ +G+ I Q K+  D+L EAGL   KPL  P++ N
Sbjct: 849  YFLGIEVARSTDGILISQRKYTLDILDEAGLLGAKPLLTPMEEN 892



 Score = 37.0 bits (84), Expect(2) = 9e-23
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +2

Query: 323 QLSPTDGVLLDDPSIYRKFVGKLLYLTVS 409
           +L PT G LL +PS YR+ VG+L+YLT++
Sbjct: 894 KLLPTVGDLLKNPSTYRRLVGQLIYLTIT 922


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  100 bits (250), Expect(2) = 2e-22
 Identities = 45/104 (43%), Positives = 72/104 (69%)
 Frame = +3

Query: 9    GFTYTVADYLLFVYKSEDIFVTALVYVDDILLTGTSTEFMTRVKSELHSAFTIKDLGLAK 188
            GFT +++DY LF Y ++ IFV  LVYVDD++++G+  + + + KS L S F +KDLGL K
Sbjct: 1126 GFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLK 1185

Query: 189  YYLGLELHKTDEGLYIHQHKFVYDLLVEAGLDNCKPLSLPVDIN 320
            Y+LG+E+ +  +G Y+ Q K+V D++ E GL   +P + P++ N
Sbjct: 1186 YFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQN 1229



 Score = 30.0 bits (66), Expect(2) = 2e-22
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 323  QLSPTDGVLLDDPSIYRKFVGKLLYLTVS 409
            +LS +   LL D S YR+ VG+L+YL V+
Sbjct: 1231 KLSLSTSPLLSDSSRYRRLVGRLIYLVVT 1259


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 94.0 bits (232), Expect(2) = 2e-22
 Identities = 45/104 (43%), Positives = 66/104 (63%)
 Frame = +3

Query: 9    GFTYTVADYLLFVYKSEDIFVTALVYVDDILLTGTSTEFMTRVKSELHSAFTIKDLGLAK 188
            GF  + ADY LF   S + F   L+YVDD+++TG     +  +K  LH+ F IKDLG  +
Sbjct: 1119 GFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLR 1178

Query: 189  YYLGLELHKTDEGLYIHQHKFVYDLLVEAGLDNCKPLSLPVDIN 320
            Y+LG+E+ ++ +G+ I Q K+  D+L EAGL   KPLS P++ N
Sbjct: 1179 YFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEEN 1222



 Score = 37.0 bits (84), Expect(2) = 2e-22
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +2

Query: 323  QLSPTDGVLLDDPSIYRKFVGKLLYLTVS 409
            +L PT G LL +PS YR+ VG+L+YLT++
Sbjct: 1224 KLLPTVGDLLKNPSTYRRLVGQLIYLTIT 1252